ID F6HDM1_VITVI Unreviewed; 262 AA.
AC F6HDM1;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE RecName: Full=Histone H2A/H2B/H3 domain-containing protein {ECO:0000259|Pfam:PF00125};
GN OrderedLocusNames=VIT_05s0020g02790 {ECO:0000313|EMBL:CCB50392.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB50392.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NFYC/HAP5 subunit family.
CC {ECO:0000256|ARBA:ARBA00038129}.
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DR EMBL; FN595749; CCB50392.1; -; Genomic_DNA.
DR RefSeq; XP_002280741.1; XM_002280705.4.
DR AlphaFoldDB; F6HDM1; -.
DR STRING; 29760.F6HDM1; -.
DR PaxDb; 29760-VIT_05s0020g02790-t01; -.
DR EnsemblPlants; Vitvi05g00435_t001; Vitvi05g00435_P001; Vitvi05g00435.
DR GeneID; 100266507; -.
DR Gramene; Vitvi05g00435_t001; Vitvi05g00435_P001; Vitvi05g00435.
DR KEGG; vvi:100266507; -.
DR eggNOG; KOG1657; Eukaryota.
DR HOGENOM; CLU_045277_0_0_1; -.
DR InParanoid; F6HDM1; -.
DR OrthoDB; 940566at2759; -.
DR Proteomes; UP000009183; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR007125; Histone_H2A/H2B/H3.
DR PANTHER; PTHR10252; HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED; 1.
DR PANTHER; PTHR10252:SF137; TRANSCRIPTION FACTOR CBF_NF-Y_ARCHAEAL HISTONE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00125; Histone; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 61..166
FT /note="Histone H2A/H2B/H3"
FT /evidence="ECO:0000259|Pfam:PF00125"
SQ SEQUENCE 262 AA; 29157 MW; 984E198D96AF491F CRC64;
MDQPGHGQPP AMGMVGSAAQ MPYGIPPFQP NQMVGTSGPG TVGSIQSPTQ PAGISSPAQL
AQHQLAYQHI HQQQQQQLQQ QLQNFWQNQY QEIEQTTDFK NHSLPLARIK KIMKADEDVR
MISAEAPVIF ARACEMFILE LTLRSWNHTE ENKRRTLQKN DIAAAITRTD IFDFLVDIVP
REDLKDEVLA SIPRGGPLPV GGPAEGLPYF YMQPQHGPQV GAPGMVMGKT VMDQGLYGQQ
PRPYVAQQMW PQQQQQQPPA DS
//
