ID F6HFZ8_VITVI Unreviewed; 829 AA.
AC F6HFZ8;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE RecName: Full=Pre-mRNA-processing protein 40C {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_01s0010g01440 {ECO:0000313|EMBL:CCB51191.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB51191.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
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DR EMBL; FN595754; CCB51191.1; -; Genomic_DNA.
DR AlphaFoldDB; F6HFZ8; -.
DR STRING; 29760.F6HFZ8; -.
DR PaxDb; 29760-VIT_01s0010g01440-t01; -.
DR EnsemblPlants; Vitvi01g01413_t001; Vitvi01g01413_P001; Vitvi01g01413.
DR Gramene; Vitvi01g01413_t001; Vitvi01g01413_P001; Vitvi01g01413.
DR eggNOG; KOG0155; Eukaryota.
DR HOGENOM; CLU_004993_1_0_1; -.
DR InParanoid; F6HFZ8; -.
DR Proteomes; UP000009183; Chromosome 1.
DR ExpressionAtlas; F6HFZ8; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0070063; F:RNA polymerase binding; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR CDD; cd00201; WW; 2.
DR Gene3D; 2.20.70.10; -; 2.
DR Gene3D; 1.10.10.440; FF domain; 5.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR045148; TCRG1-like.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR15377; TRANSCRIPTION ELONGATION REGULATOR 1; 1.
DR PANTHER; PTHR15377:SF3; WW DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01846; FF; 4.
DR Pfam; PF00397; WW; 2.
DR SMART; SM00441; FF; 4.
DR SMART; SM00456; WW; 2.
DR SUPFAM; SSF81698; FF domain; 5.
DR SUPFAM; SSF51045; WW domain; 2.
DR PROSITE; PS51676; FF; 4.
DR PROSITE; PS01159; WW_DOMAIN_1; 2.
DR PROSITE; PS50020; WW_DOMAIN_2; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183}.
FT DOMAIN 208..235
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 260..287
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 426..480
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 493..548
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 561..615
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 664..721
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 327..346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 357..425
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 624..653
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 686..707
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 792..829
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 22..42
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 360..378
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 687..707
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..811
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 829 AA; 92108 MW; BFF59BC140F6C05B CRC64;
MSVSSSPKMG PTTLWMPSNP SFPVPSGMPV TPGTPGPPGI APSTPLSSNL AVPSASMDFS
SSVVSRAIFP AAPVSSNPAI QQQIYPSYSS LPATNASSQG PWLQPPQMGG LPRPPFVPYP
AVYPTPFPLP AHGMPLPSVP LPDSQPPGVT PVGTAGGTPI SAAVSGHHLA NTSGMLSELP
PPGIDDNKHV NGAGTKDGAA VNEQVDAWTA HKTDTGVVYY YNALTGESTY EKPSDFKGEA
DKVTVQPTPV SWEKLTGTDW ALVTTNDGKK YYYNTKTKLS SWQIPTELTE MRKKQDSVAL
KEHAMLAPNT NVSTEKGPSP IALSAPAVTT GGRDATPLRT SAVPGSASAL DMIKKKLQDS
GAPATSSPVH SSGPIASELN GSRVIEPTVK GLQSENSKDK LKDTNGDGNM SDSSSDSEDV
DSGPTKEECI IQFKEMLKER GVAPFSKWEK ELPKIVFDPR FKAIPGYSAR RSLFEHYVRT
RAEEERKEKR AAQRAAIEGF KQLLEEASED IDHKTEYQTF RKKWGDDPRF EALDRKDREL
LLNERVLPLK RAAEEKAQAI RAAAVSSFKS MLRDKGDITT STRWSRVKDS LRNDPRYKCV
KHEDREILFN EYISELKAAE EEVEREAKSK KEEQDKLKER ERELRKRKER EEQEMERVRL
KVRRKEAVSS YQALLVETIK DPQVSWTESK PKLEKDPQAR ATNSDLDPSD LEKLFREHIK
MLHERRAHEF RALLSEVLTA EAATQETEDG KTVLTSWSTA KRLLRSDTRY IKMPRKDRES
VWRRYSEEML RKQKLAQDQT EEKHTEVKGR SSVDSGRFPS GSRRAHERR
//
