ID F6HKH1_VITVI Unreviewed; 819 AA.
AC F6HKH1;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_08s0007g03980 {ECO:0000313|EMBL:CCB55393.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB55393.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; FN595991; CCB55393.1; -; Genomic_DNA.
DR RefSeq; XP_019076950.1; XM_019221405.1.
DR AlphaFoldDB; F6HKH1; -.
DR STRING; 29760.F6HKH1; -.
DR PaxDb; 29760-VIT_08s0007g03980-t01; -.
DR EnsemblPlants; Vitvi08g01522_t001; Vitvi08g01522_P001; Vitvi08g01522.
DR GeneID; 100854858; -.
DR Gramene; Vitvi08g01522_t001; Vitvi08g01522_P001; Vitvi08g01522.
DR KEGG; vvi:100854858; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_2_1; -.
DR InParanoid; F6HKH1; -.
DR OrthoDB; 448807at2759; -.
DR Proteomes; UP000009183; Chromosome 8.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR47933; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR PANTHER; PTHR47933:SF2; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 7.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 17.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 146..180
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 181..215
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 216..250
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 251..285
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 286..320
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 321..355
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 356..390
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 391..425
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 426..460
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 461..495
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 496..530
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 531..565
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 566..600
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 601..635
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 670..704
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 705..739
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 740..774
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 819 AA; 92090 MW; 7DE9E03DA3172E6A CRC64;
MAKRIHLSKF SVGSTLNKPQ KSLLLPSCKP FCSLTEKQEP TSTTNNSTTN LQGQVQEQAR
HEHVQKLQTL LQQGRTETAR RLIRSMLLPK SPFSSPSHLY TLFSLSSTPM KPLFSDMLLS
ICSESKMVSE SAELYMLMKK DGVLPSVASL NLFLESLVST KRYEDTLQLF SEIVESGLRP
DQFMYGKAIQ AAVKLGDLKR AIELMTCMKR GGVSPGVFVY NVVIGGLCKE KRMKDAEKLF
DEMLDRRVAP NRITYNTLID GYCKVGQLEE AFNIRERMKV ENVEPTIITF NSLLNGLCRA
QMMEEAQRVL EEMEVYGFVP DRFTYTTLFD GHLKCGNVDA SITLSEEAVR KGVQILDYTC
SILLNALCKE GNMEKAEEVL KKFLENGLAP VGVFFNTIVN GYCQVGDINK AYTTIEKMEA
VGLRPNHVTY NSLVKKFCEM KNMEEAEKCI KKMVEKGVLP NVETYNTLID GYGRSCLFDR
CFQILEEMEK KGLKPNVISY GCLINCLCKD ANILEAEVIL GDMVHRGVVP NAQIYNMLID
GSCIAGKLKD AFRFFDEMVA REIVPTLVTY NILINGLCKK GKVMEAENLA SEITRKGLSF
DVITYNSLIS GYSSAGNVQK ALELYETMKK SGIKPTLNTY HRLIAGCGKE GLVLVEKIYQ
EMLQMNLVPD RVIYNALIHC YVEHGDVQKA CSLHSAMEAQ GIQPDKMTYN CLILGHFKEG
RMHKVKNLVN DMKIRGLIPK TETYDILIVG HCKLKDFDGA YVWYREMFEN GFTPSVSICD
NLITGLREEG RSHDADVICS EMNMKGKDDC RADEDASAV
//
