ID F6HKY6_VITVI Unreviewed; 241 AA.
AC F6HKY6;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE RecName: Full=RING-CH-type domain-containing protein {ECO:0000259|PROSITE:PS51292};
GN OrderedLocusNames=VIT_08s0007g01530 {ECO:0000313|EMBL:CCB55528.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB55528.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
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DR EMBL; FN595991; CCB55528.1; -; Genomic_DNA.
DR RefSeq; XP_002273450.2; XM_002273414.3.
DR AlphaFoldDB; F6HKY6; -.
DR PaxDb; 29760-VIT_08s0007g01530-t01; -.
DR EnsemblPlants; Vitvi08g01297_t001; Vitvi08g01297_P001; Vitvi08g01297.
DR GeneID; 100252869; -.
DR Gramene; Vitvi08g01297_t001; Vitvi08g01297_P001; Vitvi08g01297.
DR KEGG; vvi:100252869; -.
DR eggNOG; KOG1609; Eukaryota.
DR HOGENOM; CLU_062126_1_0_1; -.
DR InParanoid; F6HKY6; -.
DR OrthoDB; 318778at2759; -.
DR Proteomes; UP000009183; Chromosome 8.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46214:SF36; RING-CH-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46214; ZINC FINGER, RING-CH-TYPE; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 217..235
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 100..166
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 241 AA; 25864 MW; 2E2C289F63BAAEED CRC64;
MSAVEMSHID LEQGGHRRSF GGSDGSDGSG DGSLCFSDAD EGSCYSLFYS TAGGSYDEYS
FACVTDAEIG GVSDSRRVSS MSDCSVEVET ENGVPEIKVH LAKAERDCRI CHLSLESSNY
ESGIPIELGC SCKEDLAAAH KHCAEAWFKI KGNKTCEICN STARNVFSAS EMELTEHSNE
TSNNATVTAT ATAPAPAAVS TTVSGAETRS FWHGHRFLNF LLACMVFAFV ISWLFHFNVP
S
//
