ID F6HZ40_VITVI Unreviewed; 737 AA.
AC F6HZ40;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 61.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN OrderedLocusNames=VIT_07s0005g00300 {ECO:0000313|EMBL:CCB59955.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB59955.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
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DR EMBL; FN596502; CCB59955.1; -; Genomic_DNA.
DR AlphaFoldDB; F6HZ40; -.
DR STRING; 29760.F6HZ40; -.
DR PaxDb; 29760-VIT_07s0005g00300-t01; -.
DR eggNOG; KOG0920; Eukaryota.
DR HOGENOM; CLU_027384_0_0_1; -.
DR InParanoid; F6HZ40; -.
DR Proteomes; UP000009183; Chromosome 7.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF221; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH8; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF18044; zf-CCCH_4; 2.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF90229; CCCH zinc finger; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1..144
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 446..473
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 476..504
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 446..473
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 476..504
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
SQ SEQUENCE 737 AA; 83616 MW; E1C9E7C6D6980619 CRC64;
MTGPSICEVL CETLSFTRHA AHILEFVAAY LAFVVTCNHL LFYQYLTEVI LATNIAESSV
TIPKVAYVID SCRSLQVFWD SNRKKEASEL TWVSKSQAEQ RRGRTGRTCD GQVFRLVTGS
FFNKLQDYEP PAILRLSLRQ QVLLICCAEP RAINDPKVLL QKALDPPDPV VVEDALRFLV
RINALEKTLP RGRYEPSFYG RLLASFSLSF DASVLILKFG DIGMLREGIL LGILMDIQPL
PILHPFGKEN LSAQYTDCYF HGDSDKSVLT GKREVAFIAN LSAFQFWQRV FKDKHRLERL
KKILKLDEMD TTQKQLPLAK IEEEWCTFHM LVQSSLNHVS EIYEDVLNSV HRFRPKFLVK
SDGPPSYYEP YEFEHTCLIT QLPDGDTDDD QFEPPSEARK CLAVPFVSPN QFQNDIIAEK
MALVIKEIRV QYTEKNSSNQ HKVVNDGKAS PCRFFVNGSC NRGNKCPFSH SLPVNEVKGP
TCKFFFSLQG CRNGDSCFFS HDLDPSVSEF SGSGECLPED GDADAVLLLQ FFPNALGGRV
LVLDDTDLHF TINLAHKFNP FKIISTTCLP NISICDPSLT AVKILWGLRE PYKAIISTEG
ENPIPWNEVE CILWFPNFES YGGNLEGQKN LIQKFFECLA VRILADAMYQ VQVILTMKNI
RFSQLQVEKL GRDCFFFLKC SFPFDESSFG ELTDKVTTKK PMLVSRATSY VFNLQPPTDI
LFGDYATAFN KRLHGTK
//
