ID F6IDM1_9SPHN Unreviewed; 302 AA.
AC F6IDM1;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:CCA90396.1};
GN ORFNames=PP1Y_Mpl4683 {ECO:0000313|EMBL:CCA90396.1};
OS Novosphingobium sp. PP1Y.
OG Plasmid Mpl {ECO:0000313|EMBL:CCA90396.1,
OG ECO:0000313|Proteomes:UP000009242}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=702113 {ECO:0000313|EMBL:CCA90396.1, ECO:0000313|Proteomes:UP000009242};
RN [1] {ECO:0000313|EMBL:CCA90396.1, ECO:0000313|Proteomes:UP000009242}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=sp. PP1Y {ECO:0000313|Proteomes:UP000009242};
RC PLASMID=Mpl {ECO:0000313|EMBL:CCA90396.1,
RC ECO:0000313|Proteomes:UP000009242};
RX PubMed=21685292; DOI=10.1128/JB.05349-11;
RA D'Argenio V., Petrillo M., Cantiello P., Naso B., Cozzuto L., Notomista E.,
RA Paolella G., Di Donato A., Salvatore F.;
RT "De novo sequencing and assembly of the whole genome of Novosphingobium sp.
RT strain PP1Y.";
RL J. Bacteriol. 193:4296-4296(2011).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; FR856861; CCA90396.1; -; Genomic_DNA.
DR RefSeq; WP_013836639.1; NC_015583.1.
DR AlphaFoldDB; F6IDM1; -.
DR KEGG; npp:PP1Y_Mpl4683; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_39_0_5; -.
DR OrthoDB; 8339333at2; -.
DR Proteomes; UP000009242; Plasmid Mpl.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30118:SF6; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO; 1.
DR PANTHER; PTHR30118; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Plasmid {ECO:0000313|EMBL:CCA90396.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000009242}.
FT DOMAIN 6..63
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 302 AA; 33477 MW; A7D6B54F3BBCDFF9 CRC64;
MRFKGMDLNL LVAFEALMET RNTARAGEKI GLSQPATSAA LSRLRAYFRD ELLVVKGRRM
FPTPLAETLL PRVRACLRSA ESVISTSSQF DPARAERLFR IVASDYVSAA LLSPLLRSLE
TSAPGVMLDL MPPESHSADL LRRGVVDLMI TPSEYGSSGL PTEPLYEDNF VVAGCLNHPL
FASQFTMEDI FTYGHIAVSL GETGSTTVGD RQLNLLGHAR KVDIIAHSFT VVPWMLVGTQ
RLAIMHERLA HIAASHFSIT YRPLPQAIEP LRQIIQYHET RASDPGLRWL IDLIRAEVKS
PI
//