ID F6RG91_HORSE Unreviewed; 468 AA.
AC F6RG91;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2023, sequence version 3.
DT 24-JAN-2024, entry version 55.
DE SubName: Full=Lamin tail domain containing 1 {ECO:0000313|Ensembl:ENSECAP00000018875.3};
GN Name=LMNTD1 {ECO:0000313|Ensembl:ENSECAP00000018875.3,
GN ECO:0000313|VGNC:VGNC:58499};
OS Equus caballus (Horse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
OX NCBI_TaxID=9796 {ECO:0000313|Ensembl:ENSECAP00000018875.3, ECO:0000313|Proteomes:UP000002281};
RN [1] {ECO:0000313|Ensembl:ENSECAP00000018875.3, ECO:0000313|Proteomes:UP000002281}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Thoroughbred {ECO:0000313|Ensembl:ENSECAP00000018875.3,
RC ECO:0000313|Proteomes:UP000002281};
RX PubMed=19892987; DOI=10.1126/science.1178158;
RG Broad Institute Genome Sequencing Platform;
RG Broad Institute Whole Genome Assembly Team;
RA Wade C.M., Giulotto E., Sigurdsson S., Zoli M., Gnerre S., Imsland F.,
RA Lear T.L., Adelson D.L., Bailey E., Bellone R.R., Bloecker H., Distl O.,
RA Edgar R.C., Garber M., Leeb T., Mauceli E., MacLeod J.N., Penedo M.C.T.,
RA Raison J.M., Sharpe T., Vogel J., Andersson L., Antczak D.F., Biagi T.,
RA Binns M.M., Chowdhary B.P., Coleman S.J., Della Valle G., Fryc S.,
RA Guerin G., Hasegawa T., Hill E.W., Jurka J., Kiialainen A., Lindgren G.,
RA Liu J., Magnani E., Mickelson J.R., Murray J., Nergadze S.G., Onofrio R.,
RA Pedroni S., Piras M.F., Raudsepp T., Rocchi M., Roeed K.H., Ryder O.A.,
RA Searle S., Skow L., Swinburne J.E., Syvaenen A.C., Tozaki T., Valberg S.J.,
RA Vaudin M., White J.R., Zody M.C., Lander E.S., Lindblad-Toh K.;
RT "Genome sequence, comparative analysis, and population genetics of the
RT domestic horse.";
RL Science 326:865-867(2009).
RN [2] {ECO:0000313|Ensembl:ENSECAP00000018875.3}
RP IDENTIFICATION.
RC STRAIN=Thoroughbred {ECO:0000313|Ensembl:ENSECAP00000018875.3};
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR AlphaFoldDB; F6RG91; -.
DR Ensembl; ENSECAT00000022817.3; ENSECAP00000018875.3; ENSECAG00000021424.4.
DR VGNC; VGNC:58499; LMNTD1.
DR GeneTree; ENSGT00910000144343; -.
DR HOGENOM; CLU_048894_0_0_1; -.
DR TreeFam; TF338357; -.
DR Proteomes; UP000002281; Chromosome 6.
DR Bgee; ENSECAG00000021424; Expressed in oviduct epithelium and 19 other cell types or tissues.
DR ExpressionAtlas; F6RG91; baseline.
DR Gene3D; 2.60.40.1260; Lamin Tail domain; 1.
DR InterPro; IPR001322; Lamin_tail_dom.
DR InterPro; IPR036415; Lamin_tail_dom_sf.
DR InterPro; IPR042840; LMNTD1.
DR PANTHER; PTHR47012; LAMIN TAIL DOMAIN-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR47012:SF1; LAMIN TAIL DOMAIN-CONTAINING PROTEIN 1; 1.
DR SUPFAM; SSF74853; Lamin A/C globular tail domain; 1.
DR PROSITE; PS51841; LTD; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002281}.
FT DOMAIN 243..345
FT /note="LTD"
FT /evidence="ECO:0000259|PROSITE:PS51841"
FT REGION 44..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 422..468
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 46..75
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..116
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 452..468
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 468 AA; 52955 MW; 6543EADC647761A1 CRC64;
MIKSCCNRHR KQTNRATRIT KLGSEIPALK KKLLSEETNN STFIRRAEVE PRRRQRKAGP
RGARLEERKE TPLPAKMKDL NTIQETSAAL QSEGHEQEDK MDNQAQREDT HDNLPKTQRS
SVHFFPKMMD SDTTTLSWSR SLSNETPLSC FLSTPQISGA TVSTIGRKSK SIIVSHSRSE
NSLGINSFII PKKHTPPVTA PEPGVTGEGE DYFLSLFGDS KKLNAHSLHA EKTWKHFSMI
LEEVGQSRSS ALGDIKIAEV NVKGLFVKLI NSSLDKELEI GDHILQQNVN GQIICLYRFL
PNIIMQANST VTAVAWYTPI HWKQAWEKLE TDIEFDRCSI VSPASRRHLF HWPEVPSTTE
EKQDQSKKDI SKCHMEPVQA FLKREKEIPP TLFPNRSPWC HSPDVPAHPY CSLIEPHITS
MAGSSLDRQP RPQSARPNPA QGPRKTRHLG YKSNRQSTQS LKNNNIQA
//