ID F6URQ0_XENTR Unreviewed; 568 AA.
AC F6URQ0;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 02-JUN-2021, sequence version 4.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Coiled-coil domain-containing 78 {ECO:0000313|Ensembl:ENSXETP00000033906};
DE SubName: Full=Coiled-coil domain-containing protein 78 isoform X1 {ECO:0000313|RefSeq:XP_002940277.2};
GN Name=ccdc78 {ECO:0000313|Ensembl:ENSXETP00000033906,
GN ECO:0000313|RefSeq:XP_002940277.2,
GN ECO:0000313|Xenbase:XB-GENE-5895373};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|Ensembl:ENSXETP00000033906};
RN [1] {ECO:0000313|Ensembl:ENSXETP00000033906}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nigerian {ECO:0000313|Ensembl:ENSXETP00000033906};
RX PubMed=20431018; DOI=10.1126/science.1183670;
RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L.,
RA Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R.,
RA Gerhard D.S., Goodstein D., Graves T., Grigoriev I.V., Grimwood J.,
RA Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H.,
RA Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K.,
RA Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A.,
RA Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T.,
RA Khokha M.K., Richardson P.M., Rokhsar D.S.;
RT "The genome of the Western clawed frog Xenopus tropicalis.";
RL Science 328:633-636(2010).
RN [2] {ECO:0000313|Ensembl:ENSXETP00000033906}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
RN [3] {ECO:0000313|RefSeq:XP_002940277.2}
RP IDENTIFICATION.
RC STRAIN=Nigerian {ECO:0000313|RefSeq:XP_002940277.2};
RC TISSUE=Liver and blood {ECO:0000313|RefSeq:XP_002940277.2};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_002940277.2; XM_002940231.5.
DR Ensembl; ENSXETT00000033906; ENSXETP00000033906; ENSXETG00000015542.
DR GeneID; 100489806; -.
DR KEGG; xtr:100489806; -.
DR AGR; Xenbase:XB-GENE-5895373; -.
DR CTD; 124093; -.
DR Xenbase; XB-GENE-5895373; ccdc78.
DR eggNOG; ENOG502R5JQ; Eukaryota.
DR HOGENOM; CLU_032909_1_1_1; -.
DR OMA; WAGTSKK; -.
DR TreeFam; TF336362; -.
DR Proteomes; UP000008143; Chromosome 9.
DR Bgee; ENSXETG00000015542; Expressed in mesonephros and 4 other cell types or tissues.
DR InterPro; IPR039873; CCDC78.
DR InterPro; IPR029329; DUF4472.
DR PANTHER; PTHR22106; COILED-COIL DOMAIN-CONTAINING PROTEIN 78; 1.
DR PANTHER; PTHR22106:SF5; COILED-COIL DOMAIN-CONTAINING PROTEIN 78; 1.
DR Pfam; PF14739; DUF4472; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000008143}.
FT DOMAIN 65..171
FT /note="DUF4472"
FT /evidence="ECO:0000259|Pfam:PF14739"
FT REGION 404..423
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 454..476
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 13..47
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 101..142
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 240..323
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 368..395
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 568 AA; 65667 MW; FBB156338B883339 CRC64;
MLATAMDAAD DGETSLKEQI RRLTNENVQL QDRNERLYAK LGELQDKMGK LAGSKTDLSS
KLVLSEEEKL KISKELIELQ IETNKIREHY EAETFELKNT ILTLENRLMS LELQKEKLAG
EHEAVKERLQ TVEVNRKELA DEYIVLKSNY LALSKEHEKE VAKNDELSME LLNLVSQRGQ
DETYSQSRVL VNEATAELER VKAMVNRLTA RNIKPEDVVA TEYERQKLER NLLGNQDHIR
EEIDNIKKIH ETQQQRLEER IVAMGKELQE AKRAIRNTQH KMAEQMAVLL TSQSQLQEVE
AQNSHLQLQL KELNEEYRSR LNRYIQDLAE YVDGAARAGG KSQADSSRIK AFVDSMLSDM
KASHRSREEQ LAGAARQYKK RMQNLIRKHE SLLIAYRMQR EQMMASGNQD TDPGPPEHHF
SITDPELQSQ AGQELNLLRE DKARLETQVR DLKEKKRLGD TGTANQHVEH NGALNEESWA
EIRKQLREFT HNTQEELEKE RSQLLSRALV AEEQVAELQD YVDKHLARYK QEIMRLRKLL
GSEGPRAVSA DAPQPFLSRA VRRNSHEM
//
