GenomeNet

Database: UniProt
Entry: F6UXM3_XENTR
LinkDB: F6UXM3_XENTR
Original site: F6UXM3_XENTR 
ID   F6UXM3_XENTR            Unreviewed;       388 AA.
AC   F6UXM3;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   08-MAY-2019, entry version 51.
DE   SubName: Full=Cell adhesion molecule 4 {ECO:0000313|Ensembl:ENSXETP00000033087};
GN   Name=cadm4 {ECO:0000313|Ensembl:ENSXETP00000033087,
GN   ECO:0000313|Xenbase:XB-GENE-992659};
OS   Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
OX   NCBI_TaxID=8364 {ECO:0000313|Ensembl:ENSXETP00000033087, ECO:0000313|Proteomes:UP000008143};
RN   [1] {ECO:0000313|Ensembl:ENSXETP00000033087}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Nigerian {ECO:0000313|Ensembl:ENSXETP00000033087};
RX   PubMed=20431018; DOI=10.1126/science.1183670;
RA   Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA   Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L.,
RA   Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E.,
RA   Detter J.C., Fletcher R., Gerhard D.S., Goodstein D., Graves T.,
RA   Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M.,
RA   Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N.,
RA   Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D.,
RA   Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B.,
RA   Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M.,
RA   Rokhsar D.S.;
RT   "The genome of the Western clawed frog Xenopus tropicalis.";
RL   Science 328:633-636(2010).
RN   [2] {ECO:0000313|Ensembl:ENSXETP00000033087}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUN-2011) to UniProtKB.
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DR   EMBL; AAMC01089150; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AAMC01089151; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 8364.ENSXETP00000033087; -.
DR   PaxDb; F6UXM3; -.
DR   Ensembl; ENSXETT00000033087; ENSXETP00000033087; ENSXETG00000015112.
DR   Xenbase; XB-GENE-992659; cadm4.
DR   eggNOG; ENOG410IKIN; Eukaryota.
DR   eggNOG; ENOG410ZUF7; LUCA.
DR   GeneTree; ENSGT00940000161223; -.
DR   InParanoid; F6UXM3; -.
DR   OMA; PAAILRW; -.
DR   TreeFam; TF338300; -.
DR   Proteomes; UP000008143; Unassembled WGS sequence.
DR   Bgee; ENSXETG00000015112; Expressed in 10 organ(s), highest expression level in embryo.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003234; P:bulbus arteriosus formation; IEA:Ensembl.
DR   Gene3D; 2.60.40.10; -; 3.
DR   InterPro; IPR028807; Cadm4.
DR   InterPro; IPR013162; CD80_C2-set.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR003598; Ig_sub2.
DR   InterPro; IPR013106; Ig_V-set.
DR   InterPro; IPR003585; Neurexin-like.
DR   PANTHER; PTHR45889:SF3; PTHR45889:SF3; 1.
DR   Pfam; PF08205; C2-set_2; 1.
DR   Pfam; PF07686; V-set; 1.
DR   SMART; SM00294; 4.1m; 1.
DR   SMART; SM00409; IG; 3.
DR   SMART; SM00408; IGc2; 2.
DR   SUPFAM; SSF48726; SSF48726; 3.
DR   PROSITE; PS50835; IG_LIKE; 3.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000008143};
KW   Disulfide bond {ECO:0000256|SAAS:SAAS00289593};
KW   Immunoglobulin domain {ECO:0000256|SAAS:SAAS01086444};
KW   Membrane {ECO:0000256|SAAS:SAAS00555457, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008143};
KW   Repeat {ECO:0000256|SAAS:SAAS00441186};
KW   Transmembrane {ECO:0000256|SAAS:SAAS00555511,
KW   ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAAS:SAAS00555568,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    323    347       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       21    120       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      125    217       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      224    307       Ig-like. {ECO:0000259|PROSITE:PS50835}.
SQ   SEQUENCE   388 AA;  43294 MW;  C9B1B7F4414B9BB7 CRC64;
     LGAVRLFGAE IEISIWGGMC PPFVSQEVQA ENVTVVEGGT AEISCHLHQY DGSIVVIQNP
     VRQTLFFNGT RALKDTRFQL VEFTQKVVKI HLSDAKLEDE GGYFCQLYTE DTHHQIATLT
     VIVPPDNPLV EVKEQAVEGG EIELTCISPR TRPAATLRWY RDRKELKGFT SKQENGKTFS
     ITNSIRFSVD RKDDRDIVTC EASHPALKGQ KKQTQYELDV QFSPTANIQP SQSLVREGDE
     LNLKCEVTGN PRPTEIIWTR LNDSLPERAQ IQGDVLSFPS LSLQDNGTYS CQVSNKHGRS
     SDQYVLVVYD PGAIIEAQTQ VPYAVIGGIL ALLVFLVICI LIVMVWCSVR QKGSYLTHEA
     SGLDEHGEAR EAFLNGGENH KRKEVYLT
//
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