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Database: UniProt
Entry: F6WD51_CIOIN
LinkDB: F6WD51_CIOIN
Original site: F6WD51_CIOIN 
ID   F6WD51_CIOIN            Unreviewed;       273 AA.
AC   F6WD51; A0A1W3JIP0;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 2.
DT   05-JUN-2019, entry version 58.
DE   SubName: Full=transcription factor protein isoform X1 {ECO:0000313|RefSeq:XP_009862145.1, ECO:0000313|RefSeq:XP_026694753.1, ECO:0000313|RefSeq:XP_026694754.1};
GN   Name=atf3 {ECO:0000313|Ensembl:ENSCINP00000005786,
GN   ECO:0000313|RefSeq:XP_009862145.1, ECO:0000313|RefSeq:XP_026694753.1,
GN   ECO:0000313|RefSeq:XP_026694754.1};
OS   Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis).
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona;
OC   Phlebobranchia; Cionidae; Ciona.
OX   NCBI_TaxID=7719 {ECO:0000313|Ensembl:ENSCINP00000005786, ECO:0000313|Proteomes:UP000008144};
RN   [1] {ECO:0000313|Proteomes:UP000008144}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=12481130; DOI=10.1126/science.1080049;
RA   Dehal P., Satou Y., Campbell R.K., Chapman J., Degnan B.,
RA   De Tomaso A., Davidson B., Di Gregorio A., Gelpke M., Goodstein D.M.,
RA   Harafuji N., Hastings K.E., Ho I., Hotta K., Huang W., Kawashima T.,
RA   Lemaire P., Martinez D., Meinertzhagen I.A., Necula S., Nonaka M.,
RA   Putnam N., Rash S., Saiga H., Satake M., Terry A., Yamada L.,
RA   Wang H.G., Awazu S., Azumi K., Boore J., Branno M., Chin-Bow S.,
RA   DeSantis R., Doyle S., Francino P., Keys D.N., Haga S., Hayashi H.,
RA   Hino K., Imai K.S., Inaba K., Kano S., Kobayashi K., Kobayashi M.,
RA   Lee B.I., Makabe K.W., Manohar C., Matassi G., Medina M.,
RA   Mochizuki Y., Mount S., Morishita T., Miura S., Nakayama A.,
RA   Nishizaka S., Nomoto H., Ohta F., Oishi K., Rigoutsos I., Sano M.,
RA   Sasaki A., Sasakura Y., Shoguchi E., Shin-i T., Spagnuolo A.,
RA   Stainier D., Suzuki M.M., Tassy O., Takatori N., Tokuoka M., Yagi K.,
RA   Yoshizaki F., Wada S., Zhang C., Hyatt P.D., Larimer F., Detter C.,
RA   Doggett N., Glavina T., Hawkins T., Richardson P., Lucas S.,
RA   Kohara Y., Levine M., Satoh N., Rokhsar D.S.;
RT   "The draft genome of Ciona intestinalis: insights into chordate and
RT   vertebrate origins.";
RL   Science 298:2157-2167(2002).
RN   [2] {ECO:0000313|Ensembl:ENSCINP00000005786}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15114417; DOI=10.1007/s00239-003-2559-6;
RA   Gissi C., Iannelli F., Pesole G.;
RT   "Complete mtDNA of Ciona intestinalis reveals extensive gene
RT   rearrangement and the presence of an atp8 and an extra trnM gene in
RT   ascidians.";
RL   J. Mol. Evol. 58:376-389(2004).
RN   [3] {ECO:0000313|Ensembl:ENSCINP00000005786}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2011) to UniProtKB.
RN   [4] {ECO:0000313|RefSeq:XP_009862145.1, ECO:0000313|RefSeq:XP_026694753.1, ECO:0000313|RefSeq:XP_026694754.1}
RP   IDENTIFICATION.
RG   RefSeq;
RL   Submitted (MAR-2019) to UniProtKB.
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DR   RefSeq; XP_009862145.1; XM_009863843.1.
DR   RefSeq; XP_026694753.1; XM_026838952.1.
DR   RefSeq; XP_026694754.1; XM_026838953.1.
DR   Ensembl; ENSCINT00000005786; ENSCINP00000005786; ENSCING00000002838.
DR   GeneID; 778544; -.
DR   CTD; 467; -.
DR   eggNOG; KOG1414; Eukaryota.
DR   eggNOG; ENOG4111CH5; LUCA.
DR   GeneTree; ENSGT00940000174029; -.
DR   InParanoid; F6WD51; -.
DR   OMA; HMMTHGQ; -.
DR   OrthoDB; 1457971at2759; -.
DR   TreeFam; TF326301; -.
DR   Proteomes; UP000008144; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   InterPro; IPR000837; AP-1.
DR   InterPro; IPR004827; bZIP.
DR   PANTHER; PTHR23351; PTHR23351; 1.
DR   Pfam; PF00170; bZIP_1; 1.
DR   PRINTS; PR00042; LEUZIPPRFOS.
DR   SMART; SM00338; BRLZ; 1.
DR   PROSITE; PS50217; BZIP; 1.
DR   PROSITE; PS00036; BZIP_BASIC; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008144};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00843640};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008144}.
FT   DOMAIN      144    207       BZIP. {ECO:0000259|PROSITE:PS50217}.
FT   REGION        1     20       Disordered. {ECO:0000256|MobiDB-lite:
FT                                F6WD51}.
FT   COILED      165    203       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   273 AA;  31991 MW;  B80DCE49468F614E CRC64;
     MKLHMMTHGQ SSTPARGRVS PYYIPQSYQS TYYNNGGSRK GSIHHNVASD SNVAVDLRQG
     RRSPDNQAEY KHRNMNNQQV YNDERSLSRM TTEDLLMVEE HIRPLIKEEL RYTIQSKRIA
     RGLPETVELE YKTQQNDEIS PETLLKRERR RERNKVAAAK CRFKKKILSE QLQEESEHLE
     NLNAKLKREI EKLQEERQKL MYLLNGHKPE CIAVPEEINL DAEPQYMDKQ SDPRFNTICS
     SAANAPDNDV QQNEHTAPKT IYPYDETYLT RRL
//
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