GenomeNet

Database: UniProt
Entry: F6X544_ORNAN
LinkDB: F6X544_ORNAN
Original site: F6X544_ORNAN 
ID   F6X544_ORNAN            Unreviewed;       735 AA.
AC   F6X544;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   23-MAY-2018, entry version 45.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSOANP00000008790};
GN   Name=RFX4 {ECO:0000313|Ensembl:ENSOANP00000008790};
OS   Ornithorhynchus anatinus (Duckbill platypus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus.
OX   NCBI_TaxID=9258 {ECO:0000313|Ensembl:ENSOANP00000008790, ECO:0000313|Proteomes:UP000002279};
RN   [1] {ECO:0000313|Proteomes:UP000002279}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Glennie {ECO:0000313|Proteomes:UP000002279};
RX   PubMed=18464734; DOI=10.1038/nature06936;
RA   Warren W.C., Hillier L.W., Marshall Graves J.A., Birney E.,
RA   Ponting C.P., Grutzner F., Belov K., Miller W., Clarke L.,
RA   Chinwalla A.T., Yang S.P., Heger A., Locke D.P., Miethke P.,
RA   Waters P.D., Veyrunes F., Fulton L., Fulton B., Graves T., Wallis J.,
RA   Puente X.S., Lopez-Otin C., Ordonez G.R., Eichler E.E., Chen L.,
RA   Cheng Z., Deakin J.E., Alsop A., Thompson K., Kirby P.,
RA   Papenfuss A.T., Wakefield M.J., Olender T., Lancet D., Huttley G.A.,
RA   Smit A.F., Pask A., Temple-Smith P., Batzer M.A., Walker J.A.,
RA   Konkel M.K., Harris R.S., Whittington C.M., Wong E.S., Gemmell N.J.,
RA   Buschiazzo E., Vargas Jentzsch I.M., Merkel A., Schmitz J., Zemann A.,
RA   Churakov G., Kriegs J.O., Brosius J., Murchison E.P.,
RA   Sachidanandam R., Smith C., Hannon G.J., Tsend-Ayush E., McMillan D.,
RA   Attenborough R., Rens W., Ferguson-Smith M., Lefevre C.M., Sharp J.A.,
RA   Nicholas K.R., Ray D.A., Kube M., Reinhardt R., Pringle T.H.,
RA   Taylor J., Jones R.C., Nixon B., Dacheux J.L., Niwa H., Sekita Y.,
RA   Huang X., Stark A., Kheradpour P., Kellis M., Flicek P., Chen Y.,
RA   Webber C., Hardison R., Nelson J., Hallsworth-Pepin K., Delehaunty K.,
RA   Markovic C., Minx P., Feng Y., Kremitzki C., Mitreva M., Glasscock J.,
RA   Wylie T., Wohldmann P., Thiru P., Nhan M.N., Pohl C.S., Smith S.M.,
RA   Hou S., Nefedov M., de Jong P.J., Renfree M.B., Mardis E.R.,
RA   Wilson R.K.;
RT   "Genome analysis of the platypus reveals unique signatures of
RT   evolution.";
RL   Nature 453:175-183(2008).
RN   [2] {ECO:0000313|Ensembl:ENSOANP00000008790}
RP   IDENTIFICATION.
RC   STRAIN=Glennie {ECO:0000313|Ensembl:ENSOANP00000008790};
RG   Ensembl;
RL   Submitted (JUL-2011) to UniProtKB.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   RefSeq; XP_007668227.1; XM_007670037.1.
DR   Ensembl; ENSOANT00000008792; ENSOANP00000008790; ENSOANG00000005534.
DR   GeneID; 100077122; -.
DR   KEGG; oaa:100077122; -.
DR   CTD; 5992; -.
DR   eggNOG; ENOG410IT81; Eukaryota.
DR   eggNOG; ENOG410XSKJ; LUCA.
DR   GeneTree; ENSGT00550000074532; -.
DR   InParanoid; F6X544; -.
DR   KO; K09174; -.
DR   OMA; QLPCMRS; -.
DR   OrthoDB; EOG091G01JI; -.
DR   TreeFam; TF321340; -.
DR   Proteomes; UP000002279; Unplaced.
DR   Bgee; ENSOANG00000005534; -.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003700; F:DNA binding transcription factor activity; IBA:GO_Central.
DR   GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0060271; P:cilium assembly; IBA:GO_Central.
DR   GO; GO:0021914; P:negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning; IBA:GO_Central.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR003150; DNA-bd_RFX.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF02257; RFX_DNA_binding; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS51526; RFX_DBD; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000002279};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002279}.
FT   DOMAIN       60    135       RFX-type winged-helix.
FT                                {ECO:0000259|PROSITE:PS51526}.
SQ   SEQUENCE   735 AA;  83360 MW;  7BD6B5D3AD1B1EAF CRC64;
     MHCGLLEEPD MDSTESWIER CLNESENKRY SSHTSLGNVS NDENEEKENR ASKPHSTPAT
     LQWLEENYEI AEGVCIPRSA LYMHYLDFCE KNDTQPVNAA SFGKIIRQQF PQLTTRRLGT
     RGQSKYHYYG IAVKESSQYY DVMYSKKGAA WVSETGKKEV SKQTVAYSPR SKLGTLLPEF
     PNVKDLNLPA SLPEEKVSTF IMMYRTHCQR ILDTVIRANF DEVQSFLLHF WQGMPPHMLP
     VLGSSTVVNI VGVCDSILYK AISGVLMPTV LQALPDSLTQ VIRKFAKQLD EWLKVALHDL
     PENLRNIKFE LSRRFSQILR RQTSLNHLCQ ASRTVIHSAD ITFQMLEDWR NVDLNSITKQ
     TLYTMEDSRD EHRKLIIQLY QEFDHLLEEQ SPIESYIEWL DTMVDRCVVK VAAKRQGSLK
     KVAQQFLLMW SCFGTRVIRD MTLHSAPSFG SFHLIHLMFD DYVLYLLESL HCQERANELM
     RAMKGEGSTA DVRDEIVLAE PTPPTPSPVP SFSPAKSATS VEVPAASSPI SNPSPEYTGM
     ATTTGAMQSY TWSLTYTVTT AAGSPAENSQ QLPCMRSTHV PSSSVTHRIP VYPHREDHGY
     TGSYNYGSYS NQHPHPMQSQ YPSLPHDTAI SGPLHYSPYH RSSSQYPFNS PTSRMEPCLM
     SGAPRLHPTP VTPRWPEVPS ANPCYTSPSM HSARYGNSSD MYTPLTTRRN SEYEHMQHFP
     GFAYINGEAT TGWAK
//
DBGET integrated database retrieval system