ID F6X8K1_HORSE Unreviewed; 482 AA.
AC F6X8K1;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2023, sequence version 3.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 {ECO:0000313|Ensembl:ENSECAP00000019574.3};
GN Name=SMARCD1 {ECO:0000313|Ensembl:ENSECAP00000019574.3,
GN ECO:0000313|VGNC:VGNC:23325};
OS Equus caballus (Horse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
OX NCBI_TaxID=9796 {ECO:0000313|Ensembl:ENSECAP00000019574.3, ECO:0000313|Proteomes:UP000002281};
RN [1] {ECO:0000313|Ensembl:ENSECAP00000019574.3, ECO:0000313|Proteomes:UP000002281}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Thoroughbred {ECO:0000313|Ensembl:ENSECAP00000019574.3,
RC ECO:0000313|Proteomes:UP000002281};
RX PubMed=19892987; DOI=10.1126/science.1178158;
RG Broad Institute Genome Sequencing Platform;
RG Broad Institute Whole Genome Assembly Team;
RA Wade C.M., Giulotto E., Sigurdsson S., Zoli M., Gnerre S., Imsland F.,
RA Lear T.L., Adelson D.L., Bailey E., Bellone R.R., Bloecker H., Distl O.,
RA Edgar R.C., Garber M., Leeb T., Mauceli E., MacLeod J.N., Penedo M.C.T.,
RA Raison J.M., Sharpe T., Vogel J., Andersson L., Antczak D.F., Biagi T.,
RA Binns M.M., Chowdhary B.P., Coleman S.J., Della Valle G., Fryc S.,
RA Guerin G., Hasegawa T., Hill E.W., Jurka J., Kiialainen A., Lindgren G.,
RA Liu J., Magnani E., Mickelson J.R., Murray J., Nergadze S.G., Onofrio R.,
RA Pedroni S., Piras M.F., Raudsepp T., Rocchi M., Roeed K.H., Ryder O.A.,
RA Searle S., Skow L., Swinburne J.E., Syvaenen A.C., Tozaki T., Valberg S.J.,
RA Vaudin M., White J.R., Zody M.C., Lander E.S., Lindblad-Toh K.;
RT "Genome sequence, comparative analysis, and population genetics of the
RT domestic horse.";
RL Science 326:865-867(2009).
RN [2] {ECO:0000313|Ensembl:ENSECAP00000019574.3}
RP IDENTIFICATION.
RC STRAIN=Thoroughbred {ECO:0000313|Ensembl:ENSECAP00000019574.3};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SMARCD family.
CC {ECO:0000256|ARBA:ARBA00010619}.
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DR AlphaFoldDB; F6X8K1; -.
DR Ensembl; ENSECAT00000023621.3; ENSECAP00000019574.3; ENSECAG00000021885.4.
DR VGNC; VGNC:23325; SMARCD1.
DR GeneTree; ENSGT00940000156629; -.
DR HOGENOM; CLU_023529_0_2_1; -.
DR TreeFam; TF106486; -.
DR Proteomes; UP000002281; Chromosome 6.
DR Bgee; ENSECAG00000021885; Expressed in retina and 23 other cell types or tissues.
DR ExpressionAtlas; F6X8K1; baseline.
DR GO; GO:0016514; C:SWI/SNF complex; IEA:UniProt.
DR CDD; cd17674; SWIB_BAF60A; 1.
DR Gene3D; 1.10.245.10; SWIB/MDM2 domain; 1.
DR InterPro; IPR038041; SMARCD1_SWIB_dom.
DR InterPro; IPR019835; SWIB_domain.
DR InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR InterPro; IPR003121; SWIB_MDM2_domain.
DR PANTHER; PTHR13844; SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D; 1.
DR PANTHER; PTHR13844:SF1; SWI_SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D MEMBER 1; 1.
DR Pfam; PF02201; SWIB; 1.
DR SMART; SM00151; SWIB; 1.
DR SUPFAM; SSF47592; SWIB/MDM2 domain; 1.
DR PROSITE; PS51925; SWIB_MDM2; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000002281}.
FT DOMAIN 257..334
FT /note="DM2"
FT /evidence="ECO:0000259|PROSITE:PS51925"
FT REGION 1..104
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 482 AA; 54347 MW; 81F96081558CCBDD CRC64;
MAARAGFQSV APSGGAGASG GAGAAAALGP GGTPGPPVRM GPAPGQGLYR SPMPGAAYPR
PGMLPGSRMT PQGPSMGPPG YGGNPSVRPG LAQSGMDQSR KRPAPQQIQQ VQQQAVQNRN
HKKLDQTIMR KRLDIQEALK RPIKQKRKLR IFISNTFNPA KSDAEDGEGT VASWELRVEG
RLLEDSALSK YDATKQKRKF SSFFKSLVIE LDKDLYGPDN HLVEWHRTAT TQETDGFQVK
RPGDVNVRCT VLLMLDYQPP QFKLDPRLAR LLGIHTQTRP VIIQALWQYI KTHKLQDPHE
REFVICDKYL QQIFESQRMK FSEIPQRLHA LLMPPEPIII NHVISVDPND QKKTACYDID
VEVDDTLKTQ MNSFLLSTAS QQEIATLDNK IHETIETINQ LKTQREFMLS FARDPQGFIN
DWLQSQCRDL KTMTDVVGNP EEERRAEFYF QPWAQEAVCR YFYSKVQQRR QELEQALGIR
NT
//
