GenomeNet

Database: UniProt
Entry: F7DRT0_ORNAN
LinkDB: F7DRT0_ORNAN
Original site: F7DRT0_ORNAN 
ID   F7DRT0_ORNAN            Unreviewed;       252 AA.
AC   F7DRT0;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   02-DEC-2020, sequence version 2.
DT   24-JAN-2024, entry version 67.
DE   SubName: Full=TNF superfamily member 13b {ECO:0000313|Ensembl:ENSOANP00000024566.2};
GN   Name=TNFSF13B {ECO:0000313|Ensembl:ENSOANP00000024566.2};
OS   Ornithorhynchus anatinus (Duckbill platypus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Monotremata; Ornithorhynchidae; Ornithorhynchus.
OX   NCBI_TaxID=9258 {ECO:0000313|Ensembl:ENSOANP00000024566.2, ECO:0000313|Proteomes:UP000002279};
RN   [1] {ECO:0000313|Ensembl:ENSOANP00000024566.2, ECO:0000313|Proteomes:UP000002279}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Glennie {ECO:0000313|Ensembl:ENSOANP00000024566.2,
RC   ECO:0000313|Proteomes:UP000002279};
RX   PubMed=18464734; DOI=10.1038/nature06936;
RA   Warren W.C., Hillier L.W., Marshall Graves J.A., Birney E., Ponting C.P.,
RA   Grutzner F., Belov K., Miller W., Clarke L., Chinwalla A.T., Yang S.P.,
RA   Heger A., Locke D.P., Miethke P., Waters P.D., Veyrunes F., Fulton L.,
RA   Fulton B., Graves T., Wallis J., Puente X.S., Lopez-Otin C., Ordonez G.R.,
RA   Eichler E.E., Chen L., Cheng Z., Deakin J.E., Alsop A., Thompson K.,
RA   Kirby P., Papenfuss A.T., Wakefield M.J., Olender T., Lancet D.,
RA   Huttley G.A., Smit A.F., Pask A., Temple-Smith P., Batzer M.A.,
RA   Walker J.A., Konkel M.K., Harris R.S., Whittington C.M., Wong E.S.,
RA   Gemmell N.J., Buschiazzo E., Vargas Jentzsch I.M., Merkel A., Schmitz J.,
RA   Zemann A., Churakov G., Kriegs J.O., Brosius J., Murchison E.P.,
RA   Sachidanandam R., Smith C., Hannon G.J., Tsend-Ayush E., McMillan D.,
RA   Attenborough R., Rens W., Ferguson-Smith M., Lefevre C.M., Sharp J.A.,
RA   Nicholas K.R., Ray D.A., Kube M., Reinhardt R., Pringle T.H., Taylor J.,
RA   Jones R.C., Nixon B., Dacheux J.L., Niwa H., Sekita Y., Huang X., Stark A.,
RA   Kheradpour P., Kellis M., Flicek P., Chen Y., Webber C., Hardison R.,
RA   Nelson J., Hallsworth-Pepin K., Delehaunty K., Markovic C., Minx P.,
RA   Feng Y., Kremitzki C., Mitreva M., Glasscock J., Wylie T., Wohldmann P.,
RA   Thiru P., Nhan M.N., Pohl C.S., Smith S.M., Hou S., Nefedov M.,
RA   de Jong P.J., Renfree M.B., Mardis E.R., Wilson R.K.;
RT   "Genome analysis of the platypus reveals unique signatures of evolution.";
RL   Nature 453:175-183(2008).
RN   [2] {ECO:0000313|Ensembl:ENSOANP00000024566.2}
RP   IDENTIFICATION.
RC   STRAIN=Glennie {ECO:0000313|Ensembl:ENSOANP00000024566.2};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Secreted {ECO:0000256|ARBA:ARBA00004613}.
CC   -!- SIMILARITY: Belongs to the tumor necrosis factor family.
CC       {ECO:0000256|ARBA:ARBA00008670}.
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DR   AlphaFoldDB; F7DRT0; -.
DR   STRING; 9258.ENSOANP00000024566; -.
DR   Ensembl; ENSOANT00000024570.2; ENSOANP00000024566.2; ENSOANG00000015596.2.
DR   eggNOG; ENOG502RX35; Eukaryota.
DR   GeneTree; ENSGT00940000157536; -.
DR   HOGENOM; CLU_063693_0_0_1; -.
DR   InParanoid; F7DRT0; -.
DR   OMA; HGGQTEN; -.
DR   TreeFam; TF332331; -.
DR   Proteomes; UP000002279; Chromosome 20.
DR   Bgee; ENSOANG00000015596; Expressed in endometrium and 7 other cell types or tissues.
DR   GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR   GO; GO:0005925; C:focal adhesion; IEA:Ensembl.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IEA:Ensembl.
DR   GO; GO:0048471; C:perinuclear region of cytoplasm; IEA:Ensembl.
DR   GO; GO:0005886; C:plasma membrane; IEA:Ensembl.
DR   GO; GO:0048018; F:receptor ligand activity; IBA:GO_Central.
DR   GO; GO:0005164; F:tumor necrosis factor receptor binding; IEA:InterPro.
DR   GO; GO:0006955; P:immune response; IEA:InterPro.
DR   GO; GO:0030890; P:positive regulation of B cell proliferation; IBA:GO_Central.
DR   CDD; cd00184; TNF; 1.
DR   Gene3D; 2.60.120.40; -; 1.
DR   InterPro; IPR006052; TNF_dom.
DR   InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR   PANTHER; PTHR15151; PROTEIN EIGER; 1.
DR   PANTHER; PTHR15151:SF2; TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 13B; 1.
DR   Pfam; PF00229; TNF; 1.
DR   SUPFAM; SSF49842; TNF-like; 1.
DR   PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
DR   PROSITE; PS50049; TNF_2; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002279};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..27
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           28..252
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5027812534"
FT   DOMAIN          115..251
FT                   /note="TNF family profile"
FT                   /evidence="ECO:0000259|PROSITE:PS50049"
SQ   SEQUENCE   252 AA;  27654 MW;  1F1CD1CD639FCC8B CRC64;
     MPPAARSQRG GLVSTTFLLT FLSSCLAVGS LYQVFTLQAE LASLRGELRA YRARGECTSG
     GSPSRKRATP VRARERTVLR GVLRTQRKPV SGRERLRDGL PPGGCGSGLI QPCLQLIADS
     KSPTLHKGDS TFVPWLLSFK RGTALEEKEN KILVKETGYF FIYGQVLYTD TTFAMGHLIQ
     RKKAHVFGDD LSLVTLFRCI QNMPEILPNN SCYTAGIAKL EEGDELQLTI PRNSAKISLD
     GDGTFFGAVR LL
//
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