ID F7E7F1_MACMU Unreviewed; 994 AA.
AC F7E7F1;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 2.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=S1 RNA binding domain 1 {ECO:0000313|Ensembl:ENSMMUP00000004654.3};
GN Name=SRBD1 {ECO:0000313|Ensembl:ENSMMUP00000004654.3,
GN ECO:0000313|VGNC:VGNC:106226};
OS Macaca mulatta (Rhesus macaque).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini;
OC Cercopithecidae; Cercopithecinae; Macaca.
OX NCBI_TaxID=9544 {ECO:0000313|Ensembl:ENSMMUP00000004654.3, ECO:0000313|Proteomes:UP000006718};
RN [1] {ECO:0000313|Proteomes:UP000006718}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=17573 {ECO:0000313|Proteomes:UP000006718};
RX PubMed=17431167; DOI=10.1126/science.1139247;
RA Gibbs R.A., Rogers J., Katze M.G., Bumgarner R., Weinstock G.M.,
RA Mardis E.R., Remington K.A., Strausberg R.L., Venter J.C., Wilson R.K.,
RA Batzer M.A., Bustamante C.D., Eichler E.E., Hahn M.W., Hardison R.C.,
RA Makova K.D., Miller W., Milosavljevic A., Palermo R.E., Siepel A.,
RA Sikela J.M., Attaway T., Bell S., Bernard K.E., Buhay C.J.,
RA Chandrabose M.N., Dao M., Davis C., Delehaunty K.D., Ding Y., Dinh H.H.,
RA Dugan-Rocha S., Fulton L.A., Gabisi R.A., Garner T.T., Godfrey J.,
RA Hawes A.C., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N.,
RA Joshi V., Khan Z.M., Kirkness E.F., Cree A., Fowler R.G., Lee S.,
RA Lewis L.R., Li Z., Liu Y.-S., Moore S.M., Muzny D., Nazareth L.V.,
RA Ngo D.N., Okwuonu G.O., Pai G., Parker D., Paul H.A., Pfannkoch C.,
RA Pohl C.S., Rogers Y.-H.C., Ruiz S.J., Sabo A., Santibanez J.,
RA Schneider B.W., Smith S.M., Sodergren E., Svatek A.F., Utterback T.R.,
RA Vattathil S., Warren W., White C.S., Chinwalla A.T., Feng Y., Halpern A.L.,
RA Hillier L.W., Huang X., Minx P., Nelson J.O., Pepin K.H., Qin X.,
RA Sutton G.G., Venter E., Walenz B.P., Wallis J.W., Worley K.C., Yang S.-P.,
RA Jones S.M., Marra M.A., Rocchi M., Schein J.E., Baertsch R., Clarke L.,
RA Csuros M., Glasscock J., Harris R.A., Havlak P., Jackson A.R., Jiang H.,
RA Liu Y., Messina D.N., Shen Y., Song H.X.-Z., Wylie T., Zhang L., Birney E.,
RA Han K., Konkel M.K., Lee J., Smit A.F.A., Ullmer B., Wang H., Xing J.,
RA Burhans R., Cheng Z., Karro J.E., Ma J., Raney B., She X., Cox M.J.,
RA Demuth J.P., Dumas L.J., Han S.-G., Hopkins J., Karimpour-Fard A.,
RA Kim Y.H., Pollack J.R., Vinar T., Addo-Quaye C., Degenhardt J., Denby A.,
RA Hubisz M.J., Indap A., Kosiol C., Lahn B.T., Lawson H.A., Marklein A.,
RA Nielsen R., Vallender E.J., Clark A.G., Ferguson B., Hernandez R.D.,
RA Hirani K., Kehrer-Sawatzki H., Kolb J., Patil S., Pu L.-L., Ren Y.,
RA Smith D.G., Wheeler D.A., Schenck I., Ball E.V., Chen R., Cooper D.N.,
RA Giardine B., Hsu F., Kent W.J., Lesk A., Nelson D.L., O'brien W.E.,
RA Pruefer K., Stenson P.D., Wallace J.C., Ke H., Liu X.-M., Wang P.,
RA Xiang A.P., Yang F., Barber G.P., Haussler D., Karolchik D., Kern A.D.,
RA Kuhn R.M., Smith K.E., Zwieg A.S.;
RT "Evolutionary and biomedical insights from the rhesus macaque genome.";
RL Science 316:222-234(2007).
RN [2] {ECO:0000313|Ensembl:ENSMMUP00000004654.3}
RP IDENTIFICATION.
RC STRAIN=17573 {ECO:0000313|Ensembl:ENSMMUP00000004654.3};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_014967765.1; XM_015112279.1.
DR AlphaFoldDB; F7E7F1; -.
DR SMR; F7E7F1; -.
DR STRING; 9544.ENSMMUP00000004654; -.
DR PaxDb; 9544-ENSMMUP00000004654; -.
DR Ensembl; ENSMMUT00000004941.4; ENSMMUP00000004654.3; ENSMMUG00000003490.4.
DR GeneID; 714485; -.
DR KEGG; mcc:714485; -.
DR CTD; 55133; -.
DR VEuPathDB; HostDB:ENSMMUG00000003490; -.
DR VGNC; VGNC:106226; SRBD1.
DR eggNOG; KOG1857; Eukaryota.
DR GeneTree; ENSGT00510000047850; -.
DR HOGENOM; CLU_030682_1_0_1; -.
DR InParanoid; F7E7F1; -.
DR OMA; RWAWRTR; -.
DR OrthoDB; 170310at2759; -.
DR TreeFam; TF313600; -.
DR Proteomes; UP000006718; Chromosome 13.
DR Bgee; ENSMMUG00000003490; Expressed in spermatocyte and 22 other cell types or tissues.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000006718}.
FT DOMAIN 918..991
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1..163
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 260..287
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 38..61
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..93
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 94..112
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..142
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 143..163
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 994 AA; 111671 MW; 7EB0553D8F4E6559 CRC64;
MSSLPRRAKV QVQGVLPKDE FSSFSELSSA SEEDDKEDSA WEPQKKVPRS RKQPPSKESK
PKRMPRVKKN TPQISDGSEV VVKEELNSSD TIADTALEDR KNKLDTVQTL KTAKTKRKCS
AQPHAAQRTK KLKVDEETSK ASNLEGESNS SETPSTSTMW GGTCKKEENE DDFTFGQSPL
KKMKTETCPQ GQPVKFPANA NNIKEEVEMN WDIVQVLSER TNIEPWVCAN TIRLFNDDNT
IPFIIRYRKE LINNLDADSL REVQQTLEEL RAVAKKVHST IQKIKKEGKM SECLLKAMLN
CKTFEELEHV SAPYKTGSKG TKAQRARQLG LEGAARALLE KPGELSLLSY IRPDVKGLST
LQDIEIGVQH ILADMIAKDK DTLDFIRNLC QNRHVCIQSS LAKVSSKKVN EKDVDKFLLY
QHFSCNIRSI HHHQILAINR GENLKVLTVK VNISDGVKDE FCRWCIQNRW RPRGFARPEL
MKILRDSLND SFKRLIYPLL CREFRAKLTS DAEKESVMMF GRNLRQLLLT SPVPGRTLMG
VDPGYKHGCK LAIISPTSQI LHTDVVYLHC GQGFREAEKI KRLLLNFNCS TVVIGNGTAC
RETEAYFADL IMKNYFAPLD VVYCIVSEAG ASIYSVSPEA NKEMPGLDPN LRSAVSIARR
VQDPLAELVK IEPKHIGVGM YQHDVSQTLL KATLDSVVEE CVSFVGVDIN ICSEVLLRHI
AGLNANRAKN IIEWREKNGP FINREQLKKV KGLGPKSFQQ CAGFIRINQD YIRTFCSQQT
ESSGQIRGVA VTSSADIEVT NEKQGKKKSK TAVNVLLKPN PLDQTCIHPE SYDIAMRFLS
SIGGTLYEIG KPEMQQKINS FLEKEGMEKI AERLQTTVHT LQVIIDGLSQ PESFDFRTDF
DKPDFKRSIV CLEDLQVGTV LTGKVENATL FGIFVDIGVG KSGLIPIRNV TEAKLSKTKK
RRSLGLGPGE RVEVQVLNID IPRSRITLDL IRVL
//
