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Database: UniProt
Entry: F7H9T7_CALJA
LinkDB: F7H9T7_CALJA
Original site: F7H9T7_CALJA 
ID   F7H9T7_CALJA            Unreviewed;      1086 AA.
AC   F7H9T7; U3CP84;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   11-DEC-2019, sequence version 2.
DT   24-JAN-2024, entry version 79.
DE   SubName: Full=Semaphorin 6D {ECO:0000313|Ensembl:ENSCJAP00000003632.2};
DE   SubName: Full=Semaphorin-6D isoform 4 {ECO:0000313|EMBL:JAB20074.1};
GN   Name=SEMA6D {ECO:0000313|EMBL:JAB20074.1,
GN   ECO:0000313|Ensembl:ENSCJAP00000003632.2};
OS   Callithrix jacchus (White-tufted-ear marmoset).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC   Callitrichinae; Callithrix; Callithrix.
OX   NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000003632.2, ECO:0000313|Proteomes:UP000008225};
RN   [1] {ECO:0000313|Ensembl:ENSCJAP00000003632.2}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:JAB20074.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Hippocampus {ECO:0000313|EMBL:JAB20074.1};
RX   PubMed=25243066; DOI=10.1186/2047-217X-3-14;
RA   Maudhoo M.D., Ren D., Gradnigo J.S., Gibbs R.M., Lubker A.C.,
RA   Moriyama E.N., French J.A., Norgren R.B.Jr.;
RT   "De novo assembly of the common marmoset transcriptome from NextGen mRNA
RT   sequences.";
RL   Gigascience 3:14-14(2014).
RN   [3] {ECO:0000313|Ensembl:ENSCJAP00000003632.2}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00352}.
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DR   EMBL; GAMS01003062; JAB20074.1; -; mRNA.
DR   RefSeq; XP_009003634.1; XM_009005386.2.
DR   RefSeq; XP_009003635.1; XM_009005387.2.
DR   RefSeq; XP_009003636.1; XM_009005388.2.
DR   RefSeq; XP_017832321.1; XM_017976832.1.
DR   RefSeq; XP_017832322.1; XM_017976833.1.
DR   STRING; 9483.ENSCJAP00000003632; -.
DR   Ensembl; ENSCJAT00000003826.4; ENSCJAP00000003632.2; ENSCJAG00000001936.5.
DR   GeneID; 100411320; -.
DR   KEGG; cjc:100411320; -.
DR   CTD; 80031; -.
DR   eggNOG; KOG3611; Eukaryota.
DR   GeneTree; ENSGT00940000159303; -.
DR   OrthoDB; 5399685at2759; -.
DR   TreeFam; TF316102; -.
DR   Proteomes; UP000008225; Chromosome 10.
DR   Bgee; ENSCJAG00000001936; Expressed in frontal cortex and 6 other cell types or tissues.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0030215; F:semaphorin receptor binding; IEA:InterPro.
DR   GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR   GO; GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.1680.10; ligand-binding face of the semaphorins, domain 2; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR002165; Plexin_repeat.
DR   InterPro; IPR001627; Semap_dom.
DR   InterPro; IPR036352; Semap_dom_sf.
DR   InterPro; IPR027231; Semaphorin.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   PANTHER; PTHR11036; SEMAPHORIN; 1.
DR   PANTHER; PTHR11036:SF65; SEMAPHORIN-6D; 1.
DR   Pfam; PF01437; PSI; 1.
DR   Pfam; PF01403; Sema; 1.
DR   SMART; SM00630; Sema; 1.
DR   SUPFAM; SSF103575; Plexin repeat; 1.
DR   SUPFAM; SSF101912; Sema domain; 1.
DR   PROSITE; PS51004; SEMA; 1.
PE   2: Evidence at transcript level;
KW   Developmental protein {ECO:0000256|ARBA:ARBA00022473};
KW   Differentiation {ECO:0000256|ARBA:ARBA00022782};
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Neurogenesis {ECO:0000256|ARBA:ARBA00022902};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008225};
KW   Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..20
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           21..1086
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5040102797"
FT   TRANSMEM        676..699
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          27..512
FT                   /note="Sema"
FT                   /evidence="ECO:0000259|PROSITE:PS51004"
FT   REGION          757..788
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          800..838
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          852..887
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          934..1086
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        800..814
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        863..887
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        941..959
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        981..1012
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1030..1054
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1086 AA;  121144 MW;  9F8A3A3BFE2DB84D CRC64;
     MRVFLLCAYI LLLMVSQLRA ISFPEDDEPL NTVDYHYSRQ YPVFRGRPSG NESQHRLDFQ
     LMLKIRDTLY IAGRDQVYTV NLNEMPKTEV IPSKKLTWRS RQQDRENCAM KGKHKDECHN
     FIKVFVPRND EMVFVCGTNA FNPMCRYYRL STLEYDGEEI SGLARCPFDA KQTNVALFAD
     GKLYSATVAD FLASDAVIYR SMGDGSALRT IKYDSKWIKE PHFLHAIEYG NYVYFFFREI
     AVEHNNLGKA VYSRVARICK NDMGGSQRVL EKHWTSFLKA RLNCSVPGDS FFYFDVLQSI
     TDIIQISGIP TVVGVFTTQL NSIPGSAVCA FSMDDIEKVF KGRFKEQKTP DSVWTAVPED
     KVPKPRPGCC AKHGVAEAYK TSIDFPDETL SFIKSHPLMD SAVPPIADEP WFTKTRVRYR
     LTAITVDHSA GPYQNYTVIF VGSEAGVVLK VLAKTSPFSL NDSILLEEID AYNHAKCNAE
     NEEDKKVISL QLDKDHHTIY VAFSSCVIRI PLSRCERYGS CKKSCIASRD PYCGWLSQGS
     CGRVTPGMLL LTEDFFAFHN HSAGGYEQDT EFGNTAHLGD CHEILPTSTT PDYKIFGGPT
     SDMEVSSSSV TTVASIPEIT PKVIDTWRPK LTSSRKFVVQ DDPNTSDFTD PLSGIPKGVR
     WEVQSGESNQ MVHMNVLITC VFAAFVLGAF IAGVAVYCYR DMFVRKNRKI HKDAESAQSC
     TDSSGSFAKL NGLFDSPVKE YQQNIDSPKL YSNLLTSRKE LPPNGDTKSM VMDHRGQPPE
     LAALPTPEST PVLHQKTLQA MKSHSEKAHG HGASRKETPQ FFPSSPPPHS PLSHGHIPSA
     IVLPNATHDY NTSFSNSNAH KAEKKLQNID HPLTKSSSKR DHRRSVDSRN TLNDLLKHLN
     DPNSNPKAIM GDIQMAHQNL MLDPMGAMSE VPPKVPNREA SLYSPPSTLP RNSPTKRVDV
     PTTPGVPMTS LERQRGYHKN SSQRHSISAM PKNLNSPNGV SLSRQPSMNR GGYMPTPTGA
     KGDYIQGTPG SVHLQPSLSR QSSYTSNGTL PRTGLKRTPS LKPDVPPKPS FVPQTPSVRP
     LNKYTY
//
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