ID F7HI83_CALJA Unreviewed; 1121 AA.
AC F7HI83;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 25-MAY-2022, sequence version 4.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=Nonsense-mediated mRNA decay factor {ECO:0000256|RuleBase:RU369098};
GN Name=SMG7 {ECO:0000313|Ensembl:ENSCJAP00000009539.4};
OS Callithrix jacchus (White-tufted-ear marmoset).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC Callitrichinae; Callithrix; Callithrix.
OX NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000009539.4, ECO:0000313|Proteomes:UP000008225};
RN [1] {ECO:0000313|Ensembl:ENSCJAP00000009539.4}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSCJAP00000009539.4}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- FUNCTION: Plays a role in nonsense-mediated mRNA decay.
CC {ECO:0000256|RuleBase:RU369098}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU369098}.
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DR AlphaFoldDB; F7HI83; -.
DR Ensembl; ENSCJAT00000010081.4; ENSCJAP00000009539.4; ENSCJAG00000005135.5.
DR GeneTree; ENSGT00940000158333; -.
DR OrthoDB; 1356823at2759; -.
DR Proteomes; UP000008225; Chromosome 18.
DR Bgee; ENSCJAG00000005135; Expressed in cerebellum and 6 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR018834; DNA/RNA-bd_Est1-type.
DR InterPro; IPR019458; Est1-like_N.
DR InterPro; IPR045153; Est1/Ebs1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR15696:SF5; NONSENSE-MEDIATED MRNA DECAY FACTOR SMG7; 1.
DR PANTHER; PTHR15696; SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7; 1.
DR Pfam; PF10374; EST1; 1.
DR Pfam; PF10373; EST1_DNA_bind; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
PE 4: Predicted;
KW Nonsense-mediated mRNA decay {ECO:0000256|ARBA:ARBA00023161,
KW ECO:0000256|RuleBase:RU369098}; Nucleus {ECO:0000256|RuleBase:RU369098};
KW Reference proteome {ECO:0000313|Proteomes:UP000008225}.
FT DOMAIN 40..153
FT /note="Telomerase activating protein Est1-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10374"
FT DOMAIN 156..415
FT /note="DNA/RNA-binding"
FT /evidence="ECO:0000259|Pfam:PF10373"
FT REGION 605..631
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 681..779
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 972..1039
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1054..1073
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1089..1121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 614..631
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 681..760
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 972..1014
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1054..1069
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1121 AA; 125652 MW; 5F9676CD275D5719 CRC64;
MSLRSNSKLG PAEVWTSRQA LQDLYQKMLV TDLEYALDKK VEQDLWNHAF KNQITTLQGQ
AKNRANPNRS EVQANLSLFL EAASGFYTQL LQELCTVFNV DLPCRVKSSQ LGIISNKQTH
TSAIVKPQSS SCSYICQHCL VHLGDIARYR NQTSQAESYY RHAAQLVPSN GQPYNQLAIL
ASSKGDHLTT IFYYCRSIAV KFPFPAASTN LQKALSKALE SRDEVKTKWG VSDFIKAFIK
FHGHVYLSKS LEKLSPLREK LEEQFKRLLF QKAFNSQQLV HVTVINLFQL HHLRDFSNET
EQHSYSQDEQ LCWTQLLALF MSFLGILCKC PLQNESPEES YNAYPLPAVK VSMDWLRLRP
RVFQEAVVDE RQYIWPWLIS LLNSFHPHEE DLSSTNATPL PEEFELQGFL ALRPSFRNLD
FSKGHQGITG DKEGQQRRIR QQRLISIGKW IADNQPRLMQ CENEVGKLLF ITEIPELILE
DPSEAKENLI LQETSVIESL AADGSPGLKS VLSTSRNLSN NCDTGEKPMV TFKENIKPRE
VNRDQGRSFP PKEVRRDYSK GITVTKNDGK KDNNKRKTET KKCTLEKLQE TGKQNVAVQV
KSQTELRKTP VSEARKTPVT QTPTQASNSQ FIPIHHPGAF PPLPSRPGFP PPTYVIPPPV
AFSMGSGYTF PAGVSVPGTF LQPTAHSPAG NQVQAGKQSH IPYSQQRPSG PGPMNQGPQQ
SQPPSQQPLT SLPAQPTAQP TSQLQVQALT QQQQSPTKAV PALGKSPPHH SGFQQYQQAD
ASKQLWNPPQ VQGPLGKIMP VKQPYYLQTQ DPIKLFEPSL QPPVMQQQPL EKKMKPFPME
PYNHNPSEVK VPEFYWDSSY SMADNRPVMA QQANMDRRGK RQTVFRPEQD PVPRMPFEKS
LLEKPSELMS HSSSFLSLTG FSLNQERYPN NSMFNEVYGK NLAPSSKAEL NPSMAPQETS
LYSLFEGTPW SPSLPASSDH STPASQSPHS SNPSSLPSSP PTHNHNSVPF SNFGPIGTPD
NRDRRTADRW KTDKPAMGGF GIDYLSATSS SESNWHQAST SSGPWTGHGP SMEDSSAVLM
ESLKSIWSSS MMHPGPSALE QLLMQQKQKQ QRGQGTMNPP H
//