GenomeNet

Database: UniProt
Entry: F7IGV6_CALJA
LinkDB: F7IGV6_CALJA
Original site: F7IGV6_CALJA 
ID   F7IGV6_CALJA            Unreviewed;       723 AA.
AC   F7IGV6;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   20-JUN-2018, sequence version 2.
DT   27-MAR-2024, entry version 60.
DE   RecName: Full=Vacuolar protein sorting-associated protein 52 homolog {ECO:0000256|ARBA:ARBA00017083};
GN   Name=VPS52 {ECO:0000313|EMBL:JAB08913.1,
GN   ECO:0000313|Ensembl:ENSCJAP00000040291.3};
OS   Callithrix jacchus (White-tufted-ear marmoset).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC   Callitrichinae; Callithrix; Callithrix.
OX   NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000040291.3, ECO:0000313|Proteomes:UP000008225};
RN   [1] {ECO:0000313|Ensembl:ENSCJAP00000040291.3}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:JAB08913.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Bladder {ECO:0000313|EMBL:JAB08913.1}, Cerebral cortex
RC   {ECO:0000313|EMBL:JAB30304.1}, Hippocampus
RC   {ECO:0000313|EMBL:JAB19430.1}, and Skeletal muscle
RC   {ECO:0000313|EMBL:JAB36981.1};
RX   PubMed=25243066; DOI=10.1186/2047-217X-3-14;
RA   Maudhoo M.D., Ren D., Gradnigo J.S., Gibbs R.M., Lubker A.C.,
RA   Moriyama E.N., French J.A., Norgren R.B.Jr.;
RT   "De novo assembly of the common marmoset transcriptome from NextGen mRNA
RT   sequences.";
RL   Gigascience 3:14-14(2014).
RN   [3] {ECO:0000313|Ensembl:ENSCJAP00000040291.3}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the VPS52 family.
CC       {ECO:0000256|ARBA:ARBA00008180}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; GAMT01002948; JAB08913.1; -; mRNA.
DR   EMBL; GAMS01003706; JAB19430.1; -; mRNA.
DR   EMBL; GAMR01003628; JAB30304.1; -; mRNA.
DR   EMBL; GAMQ01004870; JAB36981.1; -; mRNA.
DR   RefSeq; XP_008992483.1; XM_008994235.2.
DR   STRING; 9483.ENSCJAP00000040291; -.
DR   Ensembl; ENSCJAT00000042556.5; ENSCJAP00000040291.3; ENSCJAG00000021644.5.
DR   GeneID; 100385068; -.
DR   KEGG; cjc:100385068; -.
DR   CTD; 6293; -.
DR   GeneTree; ENSGT00390000008815; -.
DR   HOGENOM; CLU_010797_0_0_1; -.
DR   OrthoDB; 2723231at2759; -.
DR   TreeFam; TF314937; -.
DR   Proteomes; UP000008225; Chromosome 4.
DR   Bgee; ENSCJAG00000021644; Expressed in ovary and 6 other cell types or tissues.
DR   GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   InterPro; IPR007258; Vps52.
DR   InterPro; IPR048361; Vps52_C.
DR   InterPro; IPR048319; Vps52_CC.
DR   PANTHER; PTHR14190; SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52; 1.
DR   PANTHER; PTHR14190:SF7; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 52 HOMOLOG; 1.
DR   Pfam; PF20655; Vps52_C; 1.
DR   Pfam; PF04129; Vps52_CC; 1.
PE   2: Evidence at transcript level;
KW   Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW   Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008225};
KW   Transport {ECO:0000256|ARBA:ARBA00022448}.
FT   DOMAIN          101..273
FT                   /note="Vps52 coiled-coil"
FT                   /evidence="ECO:0000259|Pfam:PF04129"
FT   DOMAIN          290..601
FT                   /note="Vps52 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF20655"
SQ   SEQUENCE   723 AA;  82329 MW;  07A76711D8D831FC CRC64;
     MAAAATMAAA ARELVLRAGT SDMEEEEGPL ASGPGLQEPL QLGELDITSD EYILDEVDVH
     IQANLEDELV KEALKTGVDL RHYSKQVELE LQQIEQKSIR DYIQESENIA SLHNQITACD
     AVLERMEQML GAFQSDLSSI SSEIRTLQEQ SGAMNIRLRN RQAVRGKLGE LVDGLVVPSA
     LVMAILEAPV TEPRFLEQLQ ELDAKAAAVR EQEARGTAAC ADVRGVLDRL RVKAVAKIRE
     FILQKIYSFR KPMTNYQIPQ TALLKYRFFY QFLLGNERAT AKEIRDEYVE TLSKIYLSYY
     RSYLGRLMKV QYEEVAEKDD LMGVEDTAKK GFFSKPSLRS RNTIFTLGTR GSVISPTELE
     APILVPHTAQ RGEQRYPFEA LFRSQHYALL DNSCREYLFI CEFFVVSGPA AHDLFHAVMG
     RTLSMTLKHL ESYLTDCYDA IAVFLCIHIV LRFRNIAAKR DVPALDRYWE QVLALLWPRF
     EMILEMNVQS VRSTDPQRLG GLDTRPHYIT RRYAEFSSAL VSINQTIPNE RTMQLLGQLQ
     VEVENFVLRV AAEFSSRKEQ LVFLINNYDM MLGVLMERAA DDSKEVESFQ QLLNARTQEF
     IEELLSPPFG GLVAFVKEAE ALIERGQAER LRGEEARVTQ LIRGFGSSWK SSVESLSQDV
     MRSFTNFRNG TSIIQGALTQ LIQLYHRFHR VLSQPQLRAL PARAELINIH HLMVELKKHK
     PNF
//
DBGET integrated database retrieval system