ID F7IGV6_CALJA Unreviewed; 723 AA.
AC F7IGV6;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 20-JUN-2018, sequence version 2.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=Vacuolar protein sorting-associated protein 52 homolog {ECO:0000256|ARBA:ARBA00017083};
GN Name=VPS52 {ECO:0000313|EMBL:JAB08913.1,
GN ECO:0000313|Ensembl:ENSCJAP00000040291.3};
OS Callithrix jacchus (White-tufted-ear marmoset).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC Callitrichinae; Callithrix; Callithrix.
OX NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000040291.3, ECO:0000313|Proteomes:UP000008225};
RN [1] {ECO:0000313|Ensembl:ENSCJAP00000040291.3}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:JAB08913.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Bladder {ECO:0000313|EMBL:JAB08913.1}, Cerebral cortex
RC {ECO:0000313|EMBL:JAB30304.1}, Hippocampus
RC {ECO:0000313|EMBL:JAB19430.1}, and Skeletal muscle
RC {ECO:0000313|EMBL:JAB36981.1};
RX PubMed=25243066; DOI=10.1186/2047-217X-3-14;
RA Maudhoo M.D., Ren D., Gradnigo J.S., Gibbs R.M., Lubker A.C.,
RA Moriyama E.N., French J.A., Norgren R.B.Jr.;
RT "De novo assembly of the common marmoset transcriptome from NextGen mRNA
RT sequences.";
RL Gigascience 3:14-14(2014).
RN [3] {ECO:0000313|Ensembl:ENSCJAP00000040291.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the VPS52 family.
CC {ECO:0000256|ARBA:ARBA00008180}.
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DR EMBL; GAMT01002948; JAB08913.1; -; mRNA.
DR EMBL; GAMS01003706; JAB19430.1; -; mRNA.
DR EMBL; GAMR01003628; JAB30304.1; -; mRNA.
DR EMBL; GAMQ01004870; JAB36981.1; -; mRNA.
DR RefSeq; XP_008992483.1; XM_008994235.2.
DR STRING; 9483.ENSCJAP00000040291; -.
DR Ensembl; ENSCJAT00000042556.5; ENSCJAP00000040291.3; ENSCJAG00000021644.5.
DR GeneID; 100385068; -.
DR KEGG; cjc:100385068; -.
DR CTD; 6293; -.
DR GeneTree; ENSGT00390000008815; -.
DR HOGENOM; CLU_010797_0_0_1; -.
DR OrthoDB; 2723231at2759; -.
DR TreeFam; TF314937; -.
DR Proteomes; UP000008225; Chromosome 4.
DR Bgee; ENSCJAG00000021644; Expressed in ovary and 6 other cell types or tissues.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR InterPro; IPR007258; Vps52.
DR InterPro; IPR048361; Vps52_C.
DR InterPro; IPR048319; Vps52_CC.
DR PANTHER; PTHR14190; SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52; 1.
DR PANTHER; PTHR14190:SF7; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 52 HOMOLOG; 1.
DR Pfam; PF20655; Vps52_C; 1.
DR Pfam; PF04129; Vps52_CC; 1.
PE 2: Evidence at transcript level;
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000008225};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 101..273
FT /note="Vps52 coiled-coil"
FT /evidence="ECO:0000259|Pfam:PF04129"
FT DOMAIN 290..601
FT /note="Vps52 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF20655"
SQ SEQUENCE 723 AA; 82329 MW; 07A76711D8D831FC CRC64;
MAAAATMAAA ARELVLRAGT SDMEEEEGPL ASGPGLQEPL QLGELDITSD EYILDEVDVH
IQANLEDELV KEALKTGVDL RHYSKQVELE LQQIEQKSIR DYIQESENIA SLHNQITACD
AVLERMEQML GAFQSDLSSI SSEIRTLQEQ SGAMNIRLRN RQAVRGKLGE LVDGLVVPSA
LVMAILEAPV TEPRFLEQLQ ELDAKAAAVR EQEARGTAAC ADVRGVLDRL RVKAVAKIRE
FILQKIYSFR KPMTNYQIPQ TALLKYRFFY QFLLGNERAT AKEIRDEYVE TLSKIYLSYY
RSYLGRLMKV QYEEVAEKDD LMGVEDTAKK GFFSKPSLRS RNTIFTLGTR GSVISPTELE
APILVPHTAQ RGEQRYPFEA LFRSQHYALL DNSCREYLFI CEFFVVSGPA AHDLFHAVMG
RTLSMTLKHL ESYLTDCYDA IAVFLCIHIV LRFRNIAAKR DVPALDRYWE QVLALLWPRF
EMILEMNVQS VRSTDPQRLG GLDTRPHYIT RRYAEFSSAL VSINQTIPNE RTMQLLGQLQ
VEVENFVLRV AAEFSSRKEQ LVFLINNYDM MLGVLMERAA DDSKEVESFQ QLLNARTQEF
IEELLSPPFG GLVAFVKEAE ALIERGQAER LRGEEARVTQ LIRGFGSSWK SSVESLSQDV
MRSFTNFRNG TSIIQGALTQ LIQLYHRFHR VLSQPQLRAL PARAELINIH HLMVELKKHK
PNF
//