ID F7IKB5_CALJA Unreviewed; 157 AA.
AC F7IKB5;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=Transmembrane protein 50A {ECO:0000313|EMBL:JAB19163.1, ECO:0000313|Ensembl:ENSCJAP00000065762.1};
GN Name=TMEM50A {ECO:0000313|EMBL:JAB19163.1,
GN ECO:0000313|Ensembl:ENSCJAP00000065762.1};
OS Callithrix jacchus (White-tufted-ear marmoset).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC Callitrichinae; Callithrix; Callithrix.
OX NCBI_TaxID=9483 {ECO:0000313|EMBL:JAB19163.1};
RN [1] {ECO:0000313|Ensembl:ENSCJAP00000065762.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:JAB19163.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Bladder {ECO:0000313|EMBL:JAB06718.1}, Cerebellum
RC {ECO:0000313|EMBL:JAB47080.1}, Cerebral cortex
RC {ECO:0000313|EMBL:JAB27619.1}, Hippocampus
RC {ECO:0000313|EMBL:JAB19163.1}, and Skeletal muscle
RC {ECO:0000313|EMBL:JAB34925.1};
RX PubMed=25243066; DOI=10.1186/2047-217X-3-14;
RA Maudhoo M.D., Ren D., Gradnigo J.S., Gibbs R.M., Lubker A.C.,
RA Moriyama E.N., French J.A., Norgren R.B.Jr.;
RT "De novo assembly of the common marmoset transcriptome from NextGen mRNA
RT sequences.";
RL Gigascience 3:14-14(2014).
RN [3] {ECO:0000313|Ensembl:ENSCJAP00000065762.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the UPF0220 family.
CC {ECO:0000256|ARBA:ARBA00005335}.
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DR EMBL; GAMT01005143; JAB06718.1; -; mRNA.
DR EMBL; GAMS01003974; JAB19162.1; -; mRNA.
DR EMBL; GAMS01003973; JAB19163.1; -; mRNA.
DR EMBL; GAMS01003972; JAB19164.1; -; mRNA.
DR EMBL; GAMR01006313; JAB27619.1; -; mRNA.
DR EMBL; GAMR01006312; JAB27620.1; -; mRNA.
DR EMBL; GAMR01006311; JAB27621.1; -; mRNA.
DR EMBL; GAMQ01006926; JAB34925.1; -; mRNA.
DR EMBL; GAMP01005675; JAB47080.1; -; mRNA.
DR RefSeq; XP_003733420.1; XM_003733372.3.
DR RefSeq; XP_008998909.1; XM_009000661.2.
DR RefSeq; XP_017829906.1; XM_017974417.1.
DR STRING; 9483.ENSCJAP00000065762; -.
DR Ensembl; ENSCJAT00000072036.3; ENSCJAP00000065762.1; ENSCJAG00000044784.3.
DR GeneID; 100397408; -.
DR KEGG; cjc:100397408; -.
DR CTD; 23585; -.
DR eggNOG; KOG3393; Eukaryota.
DR GeneTree; ENSGT00940000157715; -.
DR HOGENOM; CLU_096876_1_0_1; -.
DR OMA; NAAHVCG; -.
DR OrthoDB; 5392709at2759; -.
DR TreeFam; TF300282; -.
DR Proteomes; UP000008225; Chromosome 7.
DR Bgee; ENSCJAG00000044784; Expressed in kidney and 6 other cell types or tissues.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
DR GO; GO:0097386; C:glial cell projection; IEA:Ensembl.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043025; C:neuronal cell body; IEA:Ensembl.
DR InterPro; IPR007919; UPF0220.
DR PANTHER; PTHR13180; SMALL MEMBRANE PROTEIN-RELATED; 1.
DR PANTHER; PTHR13180:SF1; TRANSMEMBRANE PROTEIN 50A; 1.
DR Pfam; PF05255; UPF0220; 1.
PE 2: Evidence at transcript level;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008225};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 26..49
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 55..74
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 95..120
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 126..147
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 157 AA; 17371 MW; E0BFE312EBCE10F3 CRC64;
MSGFLEGLRC SECIDWGEKR NTIASIAAGV LFFTGWWIII DAAVIYSPME DFNHSYHACG
VIATIAFLMI NAVSNGQVRG DSYSEGCLGQ TGARIWLFIG FMLAFGSLIA SMWILFGGYV
AKEKVVVYPG IAVFFQNAFI FFGGLVFKFG RTEDLWQ
//
