ID F7VW82_SORMK Unreviewed; 902 AA.
AC F7VW82;
DT 21-SEP-2011, integrated into UniProtKB/TrEMBL.
DT 21-SEP-2011, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=WGS project CABT00000000 data, contig 2.10 {ECO:0000313|EMBL:CCC09904.1};
GN ORFNames=SMAC_03460 {ECO:0000313|EMBL:CCC09904.1};
OS Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Sordariales; Sordariaceae; Sordaria.
OX NCBI_TaxID=771870 {ECO:0000313|EMBL:CCC09904.1, ECO:0000313|Proteomes:UP000001881};
RN [1] {ECO:0000313|EMBL:CCC09904.1, ECO:0000313|Proteomes:UP000001881}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC MYA-333 / DSM 997 / K(L3346) / K-hell
RC {ECO:0000313|Proteomes:UP000001881};
RC TISSUE=Mycelium {ECO:0000313|EMBL:CCC09904.1};
RX PubMed=20386741; DOI=10.1371/journal.pgen.1000891;
RA Nowrousian M., Stajich J., Chu M., Engh I., Espagne E., Halliday K.,
RA Kamerewerd J., Kempken F., Knab B., Kuo H.C., Osiewacz H.D., Poeggeler S.,
RA Read N., Seiler S., Smith K., Zickler D., Kueck U., Freitag M.;
RT "De novo assembly of a 40 Mb eukaryotic genome from short sequence reads:
RT Sordaria macrospora, a model organism for fungal morphogenesis.";
RL PLoS Genet. 6:E1000891-E1000891(2010).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCC09904.1}.
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DR EMBL; CABT02000010; CCC09904.1; -; Genomic_DNA.
DR RefSeq; XP_003353143.1; XM_003353095.1.
DR AlphaFoldDB; F7VW82; -.
DR STRING; 771870.F7VW82; -.
DR GeneID; 10810797; -.
DR KEGG; smp:SMAC_03460; -.
DR VEuPathDB; FungiDB:SMAC_03460; -.
DR eggNOG; KOG2179; Eukaryota.
DR HOGENOM; CLU_003639_1_0_1; -.
DR InParanoid; F7VW82; -.
DR OMA; KPSKFEP; -.
DR OrthoDB; 181129at2759; -.
DR Proteomes; UP000001881; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 1.
DR Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR InterPro; IPR018327; BHD_2.
DR InterPro; IPR004583; DNA_repair_Rad4.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR InterPro; IPR042488; Rad4_BHD3_sf.
DR InterPro; IPR036985; Transglutaminase-like_sf.
DR PANTHER; PTHR12135:SF3; DNA REPAIR PROTEIN RAD4; 1.
DR PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR Pfam; PF10403; BHD_1; 1.
DR Pfam; PF10404; BHD_2; 1.
DR Pfam; PF10405; BHD_3; 1.
DR Pfam; PF03835; Rad4; 1.
DR SMART; SM01030; BHD_1; 1.
DR SMART; SM01031; BHD_2; 1.
DR SMART; SM01032; BHD_3; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000001881}.
FT DOMAIN 559..616
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01030"
FT DOMAIN 618..706
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01031"
FT DOMAIN 714..788
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01032"
FT REGION 1..112
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 398..427
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 644..677
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 829..902
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 60..77
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..110
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 829..844
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 845..879
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 902 AA; 100244 MW; 4B20E5D4FC58C979 CRC64;
MAGRKRNAPG ATTTSTPRTT RASTASRRAA SARTAVPDVY REMVSEARRM VVTEDAPEAT
TPERPLKRRR PGERPTPKAE TKPTIVPEPT KMDFGDDDDD DDDQDLEFED VELPQPTVQT
ITRDSDDEDD EELELEDIAF DSQGGFSSAI AGEVQLDLNL SAQKAAMAPS RKAIERRKAL
SKSEKEIRRE IHKVHLLCLL AHVERRNKWC NSPKVQEALR PLLTEKIRKS LIPRASLNQY
GRTESLKAGL QETSTMFKTK FQITERGLRR ALWAENDEQL KNYELPDDLE TVRSKHDFLK
AAKSLSGSRD VGAQLFCALL RSIGVQARLV CSLQPLACVP GAPTMPKQSK TKSLNASKGP
SAVDRYAAAM SKYENTTVTP DPTKPSFLSS ARSRLGHPNA TAYNVPSMTA PPPAASSPSK
APSKPKTIKG ESAYPIYWVE VLDVAQQKWH PVDPLVTCSQ WRPRALEPPA SDKENALVYA
IAFDADGFAR DVTRRYAKAY NSKTKRQRID GPVSPLVPSS GSNTGERWLR HVFLRNYTAP
DFPTDLDQIE LQELAVLEGA EPMPRNVADF KDHPVYALER HLRRNEVLVP GAQSTGTVSA
GSKAPVERIY RRKDVVVARS REKWFRLGRL VKAGEEPVKV LPPKRKRTSK FGGERISSPS
RAFSEDEDED EDGEDGVGDL FGDYSLAKAG GIPLYTPQQT DLYVPPPVSA KGKIPRNKFG
NVEVYVPSMV PRGGAHIPHE RAAQAAHIIG VDYAPALTGF EWKGRKGTAR ILGVVVPEGT
AEAVRAVVQG LVDMEEEERE ERRRVEVWRM WRVMLRGLRI RERVFGNVEE AEEEGEDDGE
ERVDEEEGGG KKKDKGKAKA KAKETEEEQF DREMADAPSD VSEEFYMDMD DEGEGGGGFL
IE
//