ID F8GKL1_NITSI Unreviewed; 418 AA.
AC F8GKL1;
DT 21-SEP-2011, integrated into UniProtKB/TrEMBL.
DT 21-SEP-2011, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Integrase family protein {ECO:0000313|EMBL:AEJ01775.1};
GN OrderedLocusNames=Nit79A3_1979 {ECO:0000313|EMBL:AEJ01775.1};
OS Nitrosomonas sp. (strain Is79A3).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC Nitrosomonadaceae; Nitrosomonas.
OX NCBI_TaxID=261292 {ECO:0000313|EMBL:AEJ01775.1};
RN [1] {ECO:0000313|EMBL:AEJ01775.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Is79A3 {ECO:0000313|EMBL:AEJ01775.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M.,
RA Hauser L., Kyrpides N., Ivanova N., Pagani I., Bollmann A., Norton J.,
RA Suwa Y., Klotz M., Stein L., Laanbroek H., Arp D., Woyke T.;
RT "Complete sequence of Nitrosomonas sp. Is79A3.";
RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
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DR EMBL; CP002876; AEJ01775.1; -; Genomic_DNA.
DR AlphaFoldDB; F8GKL1; -.
DR STRING; 261292.Nit79A3_1979; -.
DR KEGG; nii:Nit79A3_1979; -.
DR eggNOG; COG0582; Bacteria.
DR HOGENOM; CLU_027562_0_2_4; -.
DR OrthoDB; 9775880at2; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR CDD; cd00801; INT_P4_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 3.30.160.390; Integrase, DNA-binding domain; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR038488; Integrase_DNA-bd_sf.
DR InterPro; IPR025166; Integrase_DNA_bind_dom.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR Pfam; PF13356; Arm-DNA-bind_3; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248};
KW Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT DOMAIN 102..183
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 214..395
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 418 AA; 46047 MW; 437A6F50EF62852F CRC64;
MARQQQRLSA LQITKLTKPG LYGDGGGLTL QITTTGAKSW LFRYMVNGRS FGMGLGPTHT
VSLAEARQKA MDARKLLING INPLTAKKQK QIAAALASAK MMTFDQCAEA YILAHKAGWK
NAKHIDQWTN TLKTYASPVF GHLPVAEIDT GLVVKCLSPI WENKTETASR LRGRIESVLG
WATTSGYRTG ENPARWKDHL ANLLATISKS SRTTHHPSLP WQHVGAFMSA LRVREGISAR
AVEFTILTAC RSGEVRGARW TEFDTISKVW TIPAERMKAK REHQIPLSDA ALALLDSISK
DRDIVFAGTQ GQPLSDMSLT AVIRRMNGDD KLVWVDASGA SVTVHGFRST FRMWAAETTN
YPREVAEHAL AHQLPDAVER AYQRGTQFAK RTALMAEWAA YCSAVKTDAV VRSIRGTA
//
