ID F9RCU8_VIBSN Unreviewed; 483 AA.
AC F9RCU8;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE SubName: Full=Putative regulatory protein {ECO:0000313|EMBL:EGU33700.1};
GN ORFNames=VIBRN418_01191 {ECO:0000313|EMBL:EGU33700.1};
OS Vibrio sp. (strain N418).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=701176 {ECO:0000313|EMBL:EGU33700.1, ECO:0000313|Proteomes:UP000003627};
RN [1] {ECO:0000313|EMBL:EGU33700.1, ECO:0000313|Proteomes:UP000003627}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=N418 {ECO:0000313|EMBL:EGU33700.1,
RC ECO:0000313|Proteomes:UP000003627};
RA Strain E.A., Brown E., Allard M.W.;
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGU33700.1}.
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DR EMBL; AFWD01000052; EGU33700.1; -; Genomic_DNA.
DR RefSeq; WP_009386239.1; NZ_AFWD01000052.1.
DR AlphaFoldDB; F9RCU8; -.
DR eggNOG; COG3829; Bacteria.
DR OMA; PKPCDVE; -.
DR Proteomes; UP000003627; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF112; REGULATORY PROTEIN-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 15..80
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 148..376
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 483 AA; 53981 MW; 9C7ACB4178A79146 CRC64;
MITLANLVNS FGPFFELLDV PIAIIDTNGT YIYYNEASAQ IDQIPRNEAM GANILSLYKD
MDAESSTMLQ AAMNGAEYRS CTQIYYNKYG NKVEYVHSTS PLYDDAGNII GAIEIGLSKN
ISQRMTKEVS ALIRTLSRHS RSGKNPTIIH RSSKMTSLVE QATRIATQDV PVMIYGATGT
GKELFAHLIH DNSERREKPF IAVNCAAIPE NLIESMMFGT EKGAYTGAEN KSGYIEMAEG
GTLFLDELNS LSIDMQPKLL RYLQDRTYWR LGGNKEHRSN VRVIAAVNEA PMQLVQEGRL
REDLFYRLCV GFITIPSLSE RKEDITLLAE HFIDKYQSSL NHTITGIAPA TKTLLESMSW
DGNVRMLENT IIRSLIFQDM PGLLLPSSIN TIDISLPREE VVSMVSAPTV SAIDVEEPSS
LEAITGSTPV NLDEAVKFYE RNIIVRALNR NRGCLSKAAR ELGVHRSTLQ YKVERHKIET
LNF
//