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Database: UniProt
Entry: F9RCU8_VIBSN
LinkDB: F9RCU8_VIBSN
Original site: F9RCU8_VIBSN 
ID   F9RCU8_VIBSN            Unreviewed;       483 AA.
AC   F9RCU8;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   19-OCT-2011, sequence version 1.
DT   24-JAN-2024, entry version 57.
DE   SubName: Full=Putative regulatory protein {ECO:0000313|EMBL:EGU33700.1};
GN   ORFNames=VIBRN418_01191 {ECO:0000313|EMBL:EGU33700.1};
OS   Vibrio sp. (strain N418).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
OX   NCBI_TaxID=701176 {ECO:0000313|EMBL:EGU33700.1, ECO:0000313|Proteomes:UP000003627};
RN   [1] {ECO:0000313|EMBL:EGU33700.1, ECO:0000313|Proteomes:UP000003627}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=N418 {ECO:0000313|EMBL:EGU33700.1,
RC   ECO:0000313|Proteomes:UP000003627};
RA   Strain E.A., Brown E., Allard M.W.;
RL   Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EGU33700.1}.
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DR   EMBL; AFWD01000052; EGU33700.1; -; Genomic_DNA.
DR   RefSeq; WP_009386239.1; NZ_AFWD01000052.1.
DR   AlphaFoldDB; F9RCU8; -.
DR   eggNOG; COG3829; Bacteria.
DR   OMA; PKPCDVE; -.
DR   Proteomes; UP000003627; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013656; PAS_4.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   PANTHER; PTHR32071:SF112; REGULATORY PROTEIN-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF08448; PAS_4; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50112; PAS; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          15..80
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          148..376
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
SQ   SEQUENCE   483 AA;  53981 MW;  9C7ACB4178A79146 CRC64;
     MITLANLVNS FGPFFELLDV PIAIIDTNGT YIYYNEASAQ IDQIPRNEAM GANILSLYKD
     MDAESSTMLQ AAMNGAEYRS CTQIYYNKYG NKVEYVHSTS PLYDDAGNII GAIEIGLSKN
     ISQRMTKEVS ALIRTLSRHS RSGKNPTIIH RSSKMTSLVE QATRIATQDV PVMIYGATGT
     GKELFAHLIH DNSERREKPF IAVNCAAIPE NLIESMMFGT EKGAYTGAEN KSGYIEMAEG
     GTLFLDELNS LSIDMQPKLL RYLQDRTYWR LGGNKEHRSN VRVIAAVNEA PMQLVQEGRL
     REDLFYRLCV GFITIPSLSE RKEDITLLAE HFIDKYQSSL NHTITGIAPA TKTLLESMSW
     DGNVRMLENT IIRSLIFQDM PGLLLPSSIN TIDISLPREE VVSMVSAPTV SAIDVEEPSS
     LEAITGSTPV NLDEAVKFYE RNIIVRALNR NRGCLSKAAR ELGVHRSTLQ YKVERHKIET
     LNF
//
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