ID   F9U5Y9_9GAMM            Unreviewed;       380 AA.
AC   F9U5Y9;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   19-OCT-2011, sequence version 1.
DT   27-MAR-2024, entry version 29.
DE   SubName: Full=Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EGV20562.1};
GN   ORFNames=ThimaDRAFT_0340 {ECO:0000313|EMBL:EGV20562.1};
OS   Thiocapsa marina 5811.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC   Thiocapsa.
OX   NCBI_TaxID=768671 {ECO:0000313|EMBL:EGV20562.1, ECO:0000313|Proteomes:UP000005459};
RN   [1] {ECO:0000313|EMBL:EGV20562.1, ECO:0000313|Proteomes:UP000005459}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=5811 {ECO:0000313|EMBL:EGV20562.1,
RC   ECO:0000313|Proteomes:UP000005459};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Han J., Cheng J.-F., Goodwin L., Pitluck S., Peters L.,
RA   Land M.L., Hauser L., Vogl K., Liu Z., Imhoff J., Thiel V., Frigaard N.-U.,
RA   Bryant D., Woyke T.J.;
RT   "The draft genome of Thiocapsa marina 5811.";
RL   Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the cytochrome ubiquinol oxidase subunit 2
CC       family. {ECO:0000256|ARBA:ARBA00007543}.
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DR   EMBL; AFWV01000001; EGV20562.1; -; Genomic_DNA.
DR   AlphaFoldDB; F9U5Y9; -.
DR   STRING; 768671.ThimaDRAFT_0340; -.
DR   PATRIC; fig|768671.3.peg.381; -.
DR   eggNOG; COG1294; Bacteria.
DR   OrthoDB; 9776710at2; -.
DR   Proteomes; UP000005459; Unassembled WGS sequence.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   InterPro; IPR003317; Cyt-d_oxidase_su2.
DR   NCBIfam; TIGR00203; cydB; 1.
DR   PANTHER; PTHR43141:SF5; CYTOCHROME BD-I UBIQUINOL OXIDASE SUBUNIT 2; 1.
DR   PANTHER; PTHR43141; CYTOCHROME BD2 SUBUNIT II; 1.
DR   Pfam; PF02322; Cyt_bd_oxida_II; 1.
DR   PIRSF; PIRSF000267; Cyt_oxidse_sub2; 1.
PE   3: Inferred from homology;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Electron transport {ECO:0000256|ARBA:ARBA00022982};
KW   Heme {ECO:0000256|ARBA:ARBA00022617}; Iron {ECO:0000256|ARBA:ARBA00023004};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005459};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT   TRANSMEM        12..40
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        85..103
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        124..146
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        166..191
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        203..225
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        263..281
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        293..316
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        336..356
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   380 AA;  41928 MW;  83A8FA84EB45F82D CRC64;
     MIIDYEVLKF IWWVLVGVLL IGFAVTDGMD MGVGALLPFL GKTDDERRVI INTIGPHWDG
     NQVWLITAGG AIFAAWPIVY ATAFSGFYFA MLLALFGLFF RPVGFDYRSK IADPRWRNAW
     DWGLFIGGVV PALVFGVAFG NLLLGVPFHL DDMLRSFYTG SFFGLFHPFA LLAGILSVTM
     LTMHGAVWLQ IRAAEPIASR AKAAARIFAL ISIAVFALAG VWLIIGVDGF KVVSMPALDA
     TPNPLTKEVV ADSWAWLANY ANHPWTLVFP VLGFAGLWAT MKLAAADRPG WGLVSGSLAI
     TGIIMTAGVS LFPFILPSRT DPNSSLIVWD AVSSHLTLTV MFWAAVIFIP LILAYTTWTY
     TKMWRRVTVE EIREQEHLAY
//