ID FB58_ARATH Reviewed; 444 AA.
AC Q0WQM8; Q9SSB3;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 27-MAR-2024, entry version 97.
DE RecName: Full=F-box protein At1g53790;
GN OrderedLocusNames=At1g53790; ORFNames=T18A20.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q0WQM8-1; Sequence=Displayed;
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF02865.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC009324; AAF02865.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE33001.1; -; Genomic_DNA.
DR EMBL; AK228664; BAF00571.1; -; mRNA.
DR PIR; A96578; A96578.
DR RefSeq; NP_175782.2; NM_104256.4. [Q0WQM8-1]
DR AlphaFoldDB; Q0WQM8; -.
DR SMR; Q0WQM8; -.
DR BioGRID; 27041; 12.
DR IntAct; Q0WQM8; 1.
DR STRING; 3702.Q0WQM8; -.
DR PaxDb; 3702-AT1G53790-2; -.
DR ProteomicsDB; 230677; -. [Q0WQM8-1]
DR EnsemblPlants; AT1G53790.1; AT1G53790.1; AT1G53790. [Q0WQM8-1]
DR GeneID; 841816; -.
DR Gramene; AT1G53790.1; AT1G53790.1; AT1G53790. [Q0WQM8-1]
DR KEGG; ath:AT1G53790; -.
DR Araport; AT1G53790; -.
DR TAIR; AT1G53790; -.
DR eggNOG; KOG0729; Eukaryota.
DR HOGENOM; CLU_027176_8_1_1; -.
DR InParanoid; Q0WQM8; -.
DR OMA; LWNNIVG; -.
DR PhylomeDB; Q0WQM8; -.
DR PRO; PR:Q0WQM8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q0WQM8; baseline and differential.
DR Genevisible; Q0WQM8; AT.
DR CDD; cd22157; F-box_AtFBW1-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR InterPro; IPR013187; F-box-assoc_dom_typ3.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR NCBIfam; TIGR01640; F_box_assoc_1; 1.
DR PANTHER; PTHR31111; BNAA05G37150D PROTEIN-RELATED; 1.
DR PANTHER; PTHR31111:SF59; F-BOX DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08268; FBA_3; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..444
FT /note="F-box protein At1g53790"
FT /id="PRO_0000283332"
FT DOMAIN 76..125
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
SQ SEQUENCE 444 AA; 51030 MW; 8FB5ECB942857F01 CRC64;
MVRDIVDDPL DEDDIALVKT YGLVPYSAPI KKVEKEIKEL TEKINDLCGI KESDTGLAPL
SKQMMQEGQP LQVGYVSCFR YIPIDLLMDI FSRVPAKSIA RFRCVSKLWE SILCRPDFKE
LFMTMSSIRP PLLLFTFQDD DGNLFFFSSP HPQIPCNENT SLVPTRYHVQ HTTDSFSEIG
SPLCGFICRR GKRNLDTMVI CNPVTGESVS LPKVELKSIN TETRPYLGYD PVRKQLKVLC
IKSDDIPNTC DEHQVLTLEN GNHLWRTIQC KPHYPKSDGI CIDGILYYTA GFDMRARVSM
VVCFDVRSEK FSFINIHVFM LMNDSCTLIN YKGKLGALQF TCLSPKRLRF WVLVNAEKNI
WTKCIYALPP LWNNLVQHTE LAIVGMTDGG EVVLSQYCLI YAFYIYYFNL ESKSLTRVQI
QDVEMFKRTR VYTSLGYVEN FKLM
//
