ID G0AK83_COLFT Unreviewed; 356 AA.
AC G0AK83;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=ABC sugar transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:AEK61768.1};
DE EC=3.6.3.17 {ECO:0000313|EMBL:AEK61768.1};
GN OrderedLocusNames=CFU_1937 {ECO:0000313|EMBL:AEK61768.1};
OS Collimonas fungivorans (strain Ter331).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Collimonas.
OX NCBI_TaxID=1005048 {ECO:0000313|EMBL:AEK61768.1, ECO:0000313|Proteomes:UP000008392};
RN [1] {ECO:0000313|EMBL:AEK61768.1, ECO:0000313|Proteomes:UP000008392}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ter331 {ECO:0000313|EMBL:AEK61768.1,
RC ECO:0000313|Proteomes:UP000008392};
RX PubMed=15305924; DOI=10.1111/j.1462-2920.2004.00673.x;
RA Leveau J.H., Gerards S., de Boer W., van Veen J.A.;
RT "Phylogeny-function analysis of (meta)genomic libraries: screening for
RT expression of ribosomal RNA genes by large-insert library fluorescent in
RT situ hybridization (LIL-FISH).";
RL Environ. Microbiol. 6:990-998(2004).
RN [2] {ECO:0000313|EMBL:AEK61768.1, ECO:0000313|Proteomes:UP000008392}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ter331 {ECO:0000313|EMBL:AEK61768.1,
RC ECO:0000313|Proteomes:UP000008392};
RX PubMed=16457898; DOI=10.1016/j.mimet.2005.12.010;
RA Leveau J.H., Gerards S., Fritsche K., Zondag G., van Veen J.A.;
RT "Genomic flank-sequencing of plasposon insertion sites for rapid
RT identification of functional genes.";
RL J. Microbiol. Methods 66:276-285(2006).
RN [3] {ECO:0000313|EMBL:AEK61768.1, ECO:0000313|Proteomes:UP000008392}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ter331 {ECO:0000313|EMBL:AEK61768.1,
RC ECO:0000313|Proteomes:UP000008392};
RX PubMed=18671744; DOI=10.1111/j.1574-6941.2008.00547.x;
RA Fritsche K., de Boer W., Gerards S., van den Berg M., van Veen J.A.,
RA Leveau J.H.;
RT "Identification and characterization of genes underlying chitinolysis in
RT Collimonas fungivorans Ter331.";
RL FEMS Microbiol. Ecol. 66:123-135(2008).
RN [4] {ECO:0000313|EMBL:AEK61768.1, ECO:0000313|Proteomes:UP000008392}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ter331 {ECO:0000313|EMBL:AEK61768.1,
RC ECO:0000313|Proteomes:UP000008392};
RX PubMed=19638176; DOI=10.1111/j.1462-2920.2009.02010.x;
RA Leveau J.H., Uroz S., de Boer W.;
RT "The bacterial genus Collimonas: mycophagy, weathering and other adaptive
RT solutions to life in oligotrophic soil environments.";
RL Environ. Microbiol. 12:281-292(2010).
RN [5] {ECO:0000313|EMBL:AEK61768.1, ECO:0000313|Proteomes:UP000008392}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ter331 {ECO:0000313|EMBL:AEK61768.1,
RC ECO:0000313|Proteomes:UP000008392};
RX PubMed=21614084; DOI=10.1038/ismej.2011.29;
RA Mela F., Fritsche K., de Boer W., van Veen J.A., de Graaff L.H.,
RA van den Berg M., Leveau J.H.;
RT "Dual transcriptional profiling of a bacterial/fungal confrontation:
RT Collimonas fungivorans versus Aspergillus niger.";
RL ISME J. 5:1494-1504(2011).
RN [6] {ECO:0000313|Proteomes:UP000008392}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ter331 {ECO:0000313|Proteomes:UP000008392};
RA Leveau J.H.;
RT "Complete sequence of Collimonas fungivorans Ter331.";
RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
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DR EMBL; CP002745; AEK61768.1; -; Genomic_DNA.
DR AlphaFoldDB; G0AK83; -.
DR STRING; 1005048.CFU_1937; -.
DR KEGG; cfu:CFU_1937; -.
DR eggNOG; COG1879; Bacteria.
DR HOGENOM; CLU_037628_3_5_4; -.
DR Proteomes; UP000008392; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0008643; P:carbohydrate transport; IEA:UniProtKB-KW.
DR CDD; cd06312; PBP1_ABC_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR30036:SF7; ABC TRANSPORTER PERIPLASMIC-BINDING PROTEIN YPHF; 1.
DR PANTHER; PTHR30036; D-XYLOSE-BINDING PERIPLASMIC PROTEIN; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000313|EMBL:AEK61768.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000008392};
KW Signal {ECO:0000256|SAM:SignalP};
KW Sugar transport {ECO:0000313|EMBL:AEK61768.1};
KW Transport {ECO:0000313|EMBL:AEK61768.1}.
FT SIGNAL 1..39
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 40..356
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003397381"
FT DOMAIN 45..298
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 356 AA; 38569 MW; DC0F8DC0AF68C7C7 CRC64;
MNKTTTETTM QRLRCKGLAR ALMVTALAMS FGAMNPSYAA NEKFVLISHA PDSDSWWNTI
KNAIKQAGED FNVTVDYRNP PNGDLADMSR LIEQAAARHY DGVIASIADF SVLKKAMENV
TAKKIPLVTI NSGTQQQSEE LGAIMHVGQP EYDAGKGAGE KAKAAGIKSF LCVNHYATNP
SSFERCRGFA EAIGVDYKKS TLDAGQDPTG IESKVSAYLR NNPGTQAVLA LGPDSASPSL
RALQKMGLKG KMWFATFDLS EEVAKGIKDG SVQFAIDQQP YLQGYIPVAV LAIMTQNKTT
DVATIQAKLK ANPKFQARLA EYGLAPLYGP RHISSGPGYI TKDNLDKVLK YAGQYR
//
