ID G0IXE2_CYCMS Unreviewed; 319 AA.
AC G0IXE2;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Helix-turn-helix, type 11 domain-containing protein {ECO:0000313|EMBL:AEL26367.1};
GN OrderedLocusNames=Cycma_2628 {ECO:0000313|EMBL:AEL26367.1};
OS Cyclobacterium marinum (strain ATCC 25205 / DSM 745 / LMG 13164 / NCIMB
OS 1802) (Flectobacillus marinus).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC Cyclobacterium.
OX NCBI_TaxID=880070 {ECO:0000313|EMBL:AEL26367.1, ECO:0000313|Proteomes:UP000001635};
RN [1] {ECO:0000313|Proteomes:UP000001635}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25205 / DSM 745 / LMG 13164 / NCIMB 1802
RC {ECO:0000313|Proteomes:UP000001635};
RA Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L.,
RA Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Chertkov O.,
RA Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V.,
RA Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Schuetze A.,
RA Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Cyclobacterium marinum DSM 745.";
RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002955; AEL26367.1; -; Genomic_DNA.
DR RefSeq; WP_014020659.1; NC_015914.1.
DR AlphaFoldDB; G0IXE2; -.
DR STRING; 880070.Cycma_2628; -.
DR KEGG; cmr:Cycma_2628; -.
DR eggNOG; COG2378; Bacteria.
DR HOGENOM; CLU_041141_5_1_10; -.
DR OrthoDB; 9815009at2; -.
DR Proteomes; UP000001635; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR028349; PafC.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF3; REGULATORY PROTEIN-RELATED; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR PIRSF; PIRSF016838; PafC; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001635};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 3..58
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 319 AA; 37234 MW; 1539AB4049AC4F60 CRC64;
MNRLNRLTAI LTQLQSKRHL PAEEIANRFE ISLRTVYRDI RALEEAGVPI TGEAGKGYTL
VEGYRLPPVM FDEKEAFSLL LAEKVIEKFT DKEISQHFQS ALIKIKSVLK DQQKLAIDHL
DEQVIYYKHE LTTPSKNEKA IQRIMSALAT GKVLQFDYIS FIKEENTSRA VEPIGMYYSL
GNWYLIGYCK LRKDYRTFRI DRIQKINITE EYFTTNHPSL KSYLKKMEEG NHLIKITIQM
DPSHVKYIET HKYNQGFVMQ EKVEDKVQLT FMVGSMEFFA RWIISIGDIV TIISPKTLSD
RMSTLLNNMT EKLKEAKYH
//
