ID G0SYA0_RHOT2 Unreviewed; 438 AA.
AC G0SYA0;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=U4/U6 snRNP-specific spliceosomal protein {ECO:0000313|EMBL:EGU12267.1};
GN ORFNames=RTG_01645 {ECO:0000313|EMBL:EGU12267.1};
OS Rhodosporidium toruloides (strain ATCC 204091 / IIP 30 / MTCC 1151) (Yeast)
OS (Rhodotorula glutinis (strain ATCC 204091)).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula.
OX NCBI_TaxID=1001064 {ECO:0000313|EMBL:EGU12267.1, ECO:0000313|Proteomes:UP000006141};
RN [1] {ECO:0000313|EMBL:EGU12267.1, ECO:0000313|Proteomes:UP000006141}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 204091 / IIP 30 / MTCC 1151
RC {ECO:0000313|Proteomes:UP000006141};
RX PubMed=24526636; DOI=10.1128/genomeA.00046-14;
RA Paul D., Magbanua Z., Arick M.II., French T., Bridges S.M., Burgess S.C.,
RA Lawrence M.L.;
RT "Genome sequence of the oleaginous yeast Rhodotorula glutinis ATCC
RT 204091.";
RL Genome Announc. 2:E0004614-E0004614(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGU12267.1}.
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DR EMBL; AEVR02000001; EGU12267.1; -; Genomic_DNA.
DR AlphaFoldDB; G0SYA0; -.
DR HOGENOM; CLU_000288_57_20_1; -.
DR InParanoid; G0SYA0; -.
DR Proteomes; UP000006141; Unassembled WGS sequence.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 4.10.280.110; Pre-mRNA processing factor 4 domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR014906; PRP4-like.
DR InterPro; IPR036285; PRP4-like_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19846; WD40 REPEAT PROTEIN; 1.
DR PANTHER; PTHR19846:SF0; WD_REPEATS_REGION DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08799; PRP4; 1.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF158230; PRP4-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 52..66
FT /note="Pre-mRNA processing factor 4 (PRP4)-like"
FT /evidence="ECO:0000259|Pfam:PF08799"
FT REPEAT 81..122
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 123..172
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 173..214
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 215..256
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 257..298
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 340..365
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 438 AA; 47864 MW; 805EFF386C9B5BEB CRC64;
MASMDIDFDD IESREVDLAT SASHPETARL LSELDRKKLA RKIALPTNDG EVRARLRELG
EPITLFAIFD NLSSFTNLGS QIGDTRAISA LRFSPDSSML LTGSWTGQAK LWSVPACKEI
RVLKGHKERI GGVAWHPEAT LSQSATAVNF ATSGADNVIK LWDLENDNSL RTLTGHDNRV
CRIAFHPSGR YLGSASYDET WRLWDVETGG ELLLQEGHSK EVYAIAFQQD GALVASGGLD
AIARVWDLRS GRTVSVLSGH SRDILSVDFS PNGYQVATGS NDDTIRIWDL RMHQAICTIP
GHKSAISDLK FFQAPPKAGA YPLTDLPRAF KDLPIFSDGW SSDPDASGDV EAKPNGTNEG
EHGEKPDFPV AGSFLVSCGF DGYIKVWSAD DWQLVRSMSN DQAGKVMSVD VSSDARFIAG
GQYDKSFRLY ARSDVDLS
//