ID G1MA55_AILME Unreviewed; 531 AA.
AC G1MA55;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 02-JUN-2021, sequence version 2.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=PARN like, ribonuclease domain containing 1 {ECO:0000313|Ensembl:ENSAMEP00000016228.2};
GN Name=PNLDC1 {ECO:0000313|Ensembl:ENSAMEP00000016228.2};
OS Ailuropoda melanoleuca (Giant panda).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda.
OX NCBI_TaxID=9646 {ECO:0000313|Ensembl:ENSAMEP00000016228.2, ECO:0000313|Proteomes:UP000008912};
RN [1] {ECO:0000313|Ensembl:ENSAMEP00000016228.2, ECO:0000313|Proteomes:UP000008912}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=20010809; DOI=10.1038/nature08696;
RA Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B.,
RA Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.,
RA Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A.,
RA Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B.,
RA Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W.,
RA Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M.,
RA Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G.,
RA Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C.,
RA Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D.,
RA Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W.,
RA Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q.,
RA Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X.,
RA Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y.,
RA Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L.,
RA Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J.,
RA Wang J.;
RT "The sequence and de novo assembly of the giant panda genome.";
RL Nature 463:311-317(2010).
RN [2] {ECO:0000313|Ensembl:ENSAMEP00000016228.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the CAF1 family.
CC {ECO:0000256|ARBA:ARBA00008372}.
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DR AlphaFoldDB; G1MA55; -.
DR STRING; 9646.ENSAMEP00000016228; -.
DR Ensembl; ENSAMET00000016902.2; ENSAMEP00000016228.2; ENSAMEG00000015371.2.
DR eggNOG; KOG1990; Eukaryota.
DR GeneTree; ENSGT00940000153167; -.
DR HOGENOM; CLU_018030_3_0_1; -.
DR InParanoid; G1MA55; -.
DR TreeFam; TF314502; -.
DR Proteomes; UP000008912; Unassembled WGS sequence.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:UniProtKB-EC.
DR GO; GO:0001825; P:blastocyst formation; IEA:Ensembl.
DR GO; GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IEA:Ensembl.
DR GO; GO:0034587; P:piRNA processing; IEA:Ensembl.
DR GO; GO:0007283; P:spermatogenesis; IEA:Ensembl.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR InterPro; IPR006941; RNase_CAF1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR15092; POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1; 1.
DR PANTHER; PTHR15092:SF49; POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1; 1.
DR Pfam; PF04857; CAF1; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008912}.
SQ SEQUENCE 531 AA; 61542 MW; 6FFD5E50A5333511 CRC64;
MDVGADEFEQ SLPLLQELVL GADFVGLDIE FTGLRSNLSC RQQISLFDLP SEWYLKTRRS
VQQFTICQIG LSVFSSIEGE TNKYVAHSCN FFLFPTTFGI LDSEFTFQAS SVQFLNQYGF
DYNKFLKNGI PYMNEEQEKK IKHNILTGNW RVRSSLDKDQ IKVVIDEVTR WLDSAEEGDW
MTLPGIAGFQ AFEVQLVLRQ ALPDIWTVLR DQGIIVKKVN KQHRWYLENT SCDRASCWKE
KILLSARGFS VFFQMLVKAQ KPLVGHNMMM DLLHLHEKFF RPLPESYDQF KLNIHNLFPV
LIDTKNVTRD IWKELNFPRV SNLSEVYEVL NSDLNPTKNS GPEVIHASKC EKYVETKYPH
EAAYDAFLCG SVLLKVAHLL LWRVRGTGPM PEPSFPLYLD VLAPYMNQVN LIRAGVPKIN
FSGPDCPSIR PPILLLHVRR WPEVSEQQVY WEFQNLCKFD VRRLSRSQFL LLTNKFKDAR
SILKEYRGHP TLQVSLYRYW RHSPNINCLL QVCGVVTTWA LLALLLGRPD L
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