ID G1ST06_RABIT Unreviewed; 157 AA.
AC G1ST06;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 2.
DT 24-JAN-2024, entry version 56.
DE SubName: Full=Transmembrane inner ear {ECO:0000313|Ensembl:ENSOCUP00000006415.3};
GN Name=TMIE {ECO:0000313|Ensembl:ENSOCUP00000006415.3};
OS Oryctolagus cuniculus (Rabbit).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.
OX NCBI_TaxID=9986 {ECO:0000313|Ensembl:ENSOCUP00000006415.3, ECO:0000313|Proteomes:UP000001811};
RN [1] {ECO:0000313|Ensembl:ENSOCUP00000006415.3, ECO:0000313|Proteomes:UP000001811}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Thorbecke inbred {ECO:0000313|Ensembl:ENSOCUP00000006415.3,
RC ECO:0000313|Proteomes:UP000001811};
RX PubMed=21993624; DOI=10.1038/nature10530;
RA Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S.,
RA Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B.,
RA Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.,
RA Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M.,
RA Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M.,
RA Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D.,
RA Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J.,
RA Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S.,
RA Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A.,
RA Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R.,
RA Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R.,
RA Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C.,
RA Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E.,
RA Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N.,
RA Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.;
RT "A high-resolution map of human evolutionary constraint using 29 mammals.";
RL Nature 478:476-482(2011).
RN [2] {ECO:0000313|Ensembl:ENSOCUP00000006415.3}
RP IDENTIFICATION.
RC STRAIN=Thorbecke {ECO:0000313|Ensembl:ENSOCUP00000006415.3};
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR EMBL; AAGW02044012; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_002713361.1; XM_002713315.3.
DR AlphaFoldDB; G1ST06; -.
DR PaxDb; 9986-ENSOCUP00000006415; -.
DR Ensembl; ENSOCUT00000007420.4; ENSOCUP00000006415.3; ENSOCUG00000007420.4.
DR GeneID; 100346196; -.
DR KEGG; ocu:100346196; -.
DR CTD; 259236; -.
DR eggNOG; ENOG502RY3K; Eukaryota.
DR GeneTree; ENSGT00390000005082; -.
DR HOGENOM; CLU_106776_1_0_1; -.
DR OMA; CCIFNCR; -.
DR OrthoDB; 5406717at2759; -.
DR Proteomes; UP000001811; Chromosome 9.
DR Bgee; ENSOCUG00000007420; Expressed in blood and 12 other cell types or tissues.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR032006; TMIE.
DR PANTHER; PTHR28635; TRANSMEMBRANE INNER EAR EXPRESSED PROTEIN; 1.
DR PANTHER; PTHR28635:SF1; TRANSMEMBRANE INNER EAR EXPRESSED PROTEIN; 1.
DR Pfam; PF16038; TMIE; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001811};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 59..81
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 116..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 120..135
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 157 AA; 17320 MW; 3A4AD8D69663056C CRC64;
MARLPPGAGP LWGLGGAAAA LGVCLAGVAG QLVEPSTAPP KPKPPPLTKE TVVFWDMRLW
HVVGIFSLFV LSIIITLCCV FNCRVPRTRK EIEARYLQRK AAKMYTDKLE TVPPLNELTE
IPGEEKKKKK KEDSVDTVAI KVEEDEKNEA KKKKGEK
//