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Database: UniProt
Entry: G1ST06_RABIT
LinkDB: G1ST06_RABIT
Original site: G1ST06_RABIT 
ID   G1ST06_RABIT            Unreviewed;       157 AA.
AC   G1ST06;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2013, sequence version 2.
DT   24-JAN-2024, entry version 56.
DE   SubName: Full=Transmembrane inner ear {ECO:0000313|Ensembl:ENSOCUP00000006415.3};
GN   Name=TMIE {ECO:0000313|Ensembl:ENSOCUP00000006415.3};
OS   Oryctolagus cuniculus (Rabbit).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.
OX   NCBI_TaxID=9986 {ECO:0000313|Ensembl:ENSOCUP00000006415.3, ECO:0000313|Proteomes:UP000001811};
RN   [1] {ECO:0000313|Ensembl:ENSOCUP00000006415.3, ECO:0000313|Proteomes:UP000001811}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Thorbecke inbred {ECO:0000313|Ensembl:ENSOCUP00000006415.3,
RC   ECO:0000313|Proteomes:UP000001811};
RX   PubMed=21993624; DOI=10.1038/nature10530;
RA   Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S.,
RA   Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B.,
RA   Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.,
RA   Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M.,
RA   Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M.,
RA   Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D.,
RA   Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J.,
RA   Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S.,
RA   Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A.,
RA   Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R.,
RA   Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R.,
RA   Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C.,
RA   Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E.,
RA   Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N.,
RA   Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.;
RT   "A high-resolution map of human evolutionary constraint using 29 mammals.";
RL   Nature 478:476-482(2011).
RN   [2] {ECO:0000313|Ensembl:ENSOCUP00000006415.3}
RP   IDENTIFICATION.
RC   STRAIN=Thorbecke {ECO:0000313|Ensembl:ENSOCUP00000006415.3};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   EMBL; AAGW02044012; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_002713361.1; XM_002713315.3.
DR   AlphaFoldDB; G1ST06; -.
DR   PaxDb; 9986-ENSOCUP00000006415; -.
DR   Ensembl; ENSOCUT00000007420.4; ENSOCUP00000006415.3; ENSOCUG00000007420.4.
DR   GeneID; 100346196; -.
DR   KEGG; ocu:100346196; -.
DR   CTD; 259236; -.
DR   eggNOG; ENOG502RY3K; Eukaryota.
DR   GeneTree; ENSGT00390000005082; -.
DR   HOGENOM; CLU_106776_1_0_1; -.
DR   OMA; CCIFNCR; -.
DR   OrthoDB; 5406717at2759; -.
DR   Proteomes; UP000001811; Chromosome 9.
DR   Bgee; ENSOCUG00000007420; Expressed in blood and 12 other cell types or tissues.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR032006; TMIE.
DR   PANTHER; PTHR28635; TRANSMEMBRANE INNER EAR EXPRESSED PROTEIN; 1.
DR   PANTHER; PTHR28635:SF1; TRANSMEMBRANE INNER EAR EXPRESSED PROTEIN; 1.
DR   Pfam; PF16038; TMIE; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001811};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        59..81
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   REGION          116..135
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        120..135
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   157 AA;  17320 MW;  3A4AD8D69663056C CRC64;
     MARLPPGAGP LWGLGGAAAA LGVCLAGVAG QLVEPSTAPP KPKPPPLTKE TVVFWDMRLW
     HVVGIFSLFV LSIIITLCCV FNCRVPRTRK EIEARYLQRK AAKMYTDKLE TVPPLNELTE
     IPGEEKKKKK KEDSVDTVAI KVEEDEKNEA KKKKGEK
//
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