ID G2LG25_CHLTF Unreviewed; 522 AA.
AC G2LG25;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=RNA polymerase sigma-54 factor {ECO:0000313|EMBL:AEP12138.1};
GN OrderedLocusNames=Cabther_A1387 {ECO:0000313|EMBL:AEP12138.1};
OS Chloracidobacterium thermophilum (strain B).
OC Bacteria; Acidobacteriota; Blastocatellia; Chloracidobacterium.
OX NCBI_TaxID=981222 {ECO:0000313|EMBL:AEP12138.1, ECO:0000313|Proteomes:UP000006791};
RN [1] {ECO:0000313|EMBL:AEP12138.1, ECO:0000313|Proteomes:UP000006791}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B {ECO:0000313|EMBL:AEP12138.1,
RC ECO:0000313|Proteomes:UP000006791};
RX PubMed=21951563; DOI=10.1111/j.1462-2920.2011.02592.x;
RA Garcia Costas A.M., Liu Z., Tomsho L.P., Schuster S.C., Ward D.M.,
RA Bryant D.A.;
RT "Complete genome of Candidatus Chloracidobacterium thermophilum, a
RT chlorophyll-based photoheterotroph belonging to the phylum Acidobacteria.";
RL Environ. Microbiol. 14:177-190(2012).
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
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DR EMBL; CP002514; AEP12138.1; -; Genomic_DNA.
DR RefSeq; WP_014099875.1; NC_016024.1.
DR AlphaFoldDB; G2LG25; -.
DR STRING; 981222.Cabther_A1387; -.
DR KEGG; ctm:Cabther_A1387; -.
DR HOGENOM; CLU_020569_0_1_0; -.
DR Proteomes; UP000006791; Chromosome 1.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR Gene3D; 1.10.10.1330; RNA polymerase sigma-54 factor, core-binding domain; 1.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR InterPro; IPR038709; RpoN_core-bd_sf.
DR NCBIfam; TIGR02395; rpoN_sigma; 1.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF00309; Sigma54_AID; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 1.
DR PRINTS; PR00045; SIGMA54FCT.
DR PROSITE; PS00717; SIGMA54_1; 1.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000006791};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 153..346
FT /note="RNA polymerase sigma factor 54 core-binding"
FT /evidence="ECO:0000259|Pfam:PF04963"
FT DOMAIN 361..518
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
FT REGION 98..119
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 522 AA; 58905 MW; 88D98F4E65CFCB9B CRC64;
MNLRPQLAPR TEQRLGLVLT PQMRQRIEML SMTLTDLAEL TMQEIVENPI LEEVDPHEPV
EDITPVDELA AEVEGEIGGL PGDAGDDAPA LTGAETETAA PALDGEAVSP ADEEPTEAPD
PFAEVDFGAM FEHYLDPGYR TLGEYEEREE QNLENRLRHH LTLQEHLQAQ IALLPLDEAT
RAAAEAIAAS LDERGFLADS CKEIAMIGGW PLEVVETARQ VVQRLDPVGC ASRDVRECFV
VQLEQQGHGD RLAVQLVRDH LDRLVPFRWP ELAKTLGVGC EVIAGEVALI RQLDPFPGRR
FARIGDGLLQ GAQLVQPELF IEKLGNDYII RFNDDGLPQL RINAKYRRIL ENPNASREER
EFIRDRLRAA VDLIRNIDYR RRTIYRICEA IIECQRDFLD HGPAHIKPMM LKDIAERVGI
HLSTVSRVVN GKYVQTPLGI IELRRFFTEG LPNDNGEVVS TDIIKMKIKK LIAEEDPREP
LTDDQIARLL AREGQRLSRR TVAKYREQMH IPGSRERRLV TG
//
