ID G3HC25_CRIGR Unreviewed; 98 AA.
AC G3HC25;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Protein S100-A13 {ECO:0000313|EMBL:EGV98147.1, ECO:0000313|RefSeq:XP_027249161.2};
DE SubName: Full=S100 calcium binding protein A13 {ECO:0000313|Ensembl:ENSCGRP00001026102.1};
GN Name=S100a13 {ECO:0000313|RefSeq:XP_027249161.2,
GN ECO:0000313|RefSeq:XP_035307098.1};
GN ORFNames=I79_008068 {ECO:0000313|EMBL:EGV98147.1};
OS Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Cricetinae; Cricetulus.
OX NCBI_TaxID=10029 {ECO:0000313|EMBL:EGV98147.1, ECO:0000313|Proteomes:UP000001075};
RN [1] {ECO:0000313|Proteomes:UP000001075}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CHO K1 cell line {ECO:0000313|Proteomes:UP000001075};
RX PubMed=21804562; DOI=10.1038/nbt.1932;
RA Xu X., Nagarajan H., Lewis N.E., Pan S., Cai Z., Liu X., Chen W., Xie M.,
RA Wang W., Hammond S., Andersen M.R., Neff N., Passarelli B., Koh W.,
RA Fan H.C., Wang J., Gui Y., Lee K.H., Betenbaugh M.J., Quake S.R.,
RA Famili I., Palsson B.O., Wang J.;
RT "The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line.";
RL Nat. Biotechnol. 29:735-741(2011).
RN [2] {ECO:0000313|EMBL:EGV98147.1}
RP NUCLEOTIDE SEQUENCE.
RA Xu X., Nagarajan H., Lewis N.E., Pan S., Cai Z., Liu X., Chen W., Xie M.,
RA Wang W., Hammond S., Andersen M.R., Neff N., Passarelli B., Koh W.,
RA Fan C.H., Wang J., Gui Y., Lee K.H., Betenbaugh M.J., Quake S.R.,
RA Famili I., Palsson B.O., Wang J.;
RT "The genomic sequence of the Chinese hamster ovary CHO-K1 cell line.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Ensembl:ENSCGRP00001026102.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
RN [4] {ECO:0000313|RefSeq:XP_027249161.2, ECO:0000313|RefSeq:XP_035307098.1}
RP IDENTIFICATION.
RC STRAIN=17A/GY {ECO:0000313|RefSeq:XP_027249161.2,
RC ECO:0000313|RefSeq:XP_035307098.1};
RC TISSUE=Liver {ECO:0000313|RefSeq:XP_027249161.2,
RC ECO:0000313|RefSeq:XP_035307098.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; JH000275; EGV98147.1; -; Genomic_DNA.
DR RefSeq; XP_027249161.2; XM_027393360.2.
DR RefSeq; XP_035307098.1; XM_035451207.1.
DR STRING; 10029.G3HC25; -.
DR PaxDb; 10029-XP_007612691-1; -.
DR Ensembl; ENSCGRT00001030348.1; ENSCGRP00001026102.1; ENSCGRG00001023525.1.
DR KEGG; cge:100769763; -.
DR eggNOG; ENOG502S3RT; Eukaryota.
DR GeneTree; ENSGT00940000161854; -.
DR OMA; TFFTFAK; -.
DR OrthoDB; 3954907at2759; -.
DR Proteomes; UP000001075; Unassembled WGS sequence.
DR Proteomes; UP000694386; Unplaced.
DR Proteomes; UP001108280; Chromosome 1.
DR GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR GO; GO:0005615; C:extracellular space; IEA:Ensembl.
DR GO; GO:0005730; C:nucleolus; IEA:Ensembl.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; IEA:Ensembl.
DR GO; GO:0005886; C:plasma membrane; IEA:Ensembl.
DR GO; GO:0005509; F:calcium ion binding; IEA:Ensembl.
DR GO; GO:0005507; F:copper ion binding; IEA:Ensembl.
DR GO; GO:0017134; F:fibroblast growth factor binding; IEA:Ensembl.
DR GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
DR GO; GO:0050786; F:RAGE receptor binding; IEA:Ensembl.
DR GO; GO:0008270; F:zinc ion binding; IEA:Ensembl.
DR GO; GO:0043123; P:positive regulation of canonical NF-kappaB signal transduction; IEA:Ensembl.
DR GO; GO:0032730; P:positive regulation of interleukin-1 alpha production; IEA:Ensembl.
DR CDD; cd05022; S-100A13; 1.
DR Gene3D; 1.10.238.10; EF-hand; 1.
DR InterPro; IPR011992; EF-hand-dom_pair.
DR InterPro; IPR013787; S100_Ca-bd_sub.
DR PANTHER; PTHR11639:SF57; PROTEIN S100-A13; 1.
DR PANTHER; PTHR11639; S100 CALCIUM-BINDING PROTEIN; 1.
DR Pfam; PF01023; S_100; 1.
DR SMART; SM01394; S_100; 1.
DR SUPFAM; SSF47473; EF-hand; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001075}.
FT DOMAIN 9..51
FT /note="S100/CaBP-9k-type calcium binding subdomain"
FT /evidence="ECO:0000259|SMART:SM01394"
SQ SEQUENCE 98 AA; 11241 MW; D9D04FAA9CBE9F52 CRC64;
MAAEPLTELE AAIETVVTTF FTFAGREGRK GSLSINEFKE LVTEQLPHLL KDVGSLDEKM
KSLDVNQDSE LKFNEYWRLI GELAKEIRKE KALEIRKK
//