ID G3N133_BOVIN Unreviewed; 525 AA.
AC G3N133;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE SubName: Full=Tigger transposable element derived 2 {ECO:0000313|Ensembl:ENSBTAP00000055555.1};
GN Name=TIGD2 {ECO:0000313|Ensembl:ENSBTAP00000055555.1,
GN ECO:0000313|VGNC:VGNC:35864};
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000055555.1, ECO:0000313|Proteomes:UP000009136};
RN [1] {ECO:0000313|Ensembl:ENSBTAP00000055555.1, ECO:0000313|Proteomes:UP000009136}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000055555.1,
RC ECO:0000313|Proteomes:UP000009136};
RA Rosen B.D., Bickhart D.M., Koren S., Schnabel R.D., Hall R., Zimin A.,
RA Dreischer C., Schultheiss S., Schroeder S.G., Elsik C.G., Couldrey C.,
RA Liu G.E., Van Tassell C.P., Phillippy A.M., Smith T.P.L., Medrano J.F.;
RT "ARS-UCD1.2.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSBTAP00000055555.1}
RP IDENTIFICATION.
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000055555.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00320}.
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DR RefSeq; XP_005198660.1; XM_005198603.3.
DR RefSeq; XP_005207873.1; XM_005207816.3.
DR AlphaFoldDB; G3N133; -.
DR SMR; G3N133; -.
DR STRING; 9913.ENSBTAP00000055555; -.
DR PaxDb; 9913-ENSBTAP00000055555; -.
DR Ensembl; ENSBTAT00000020304.6; ENSBTAP00000055555.1; ENSBTAG00000015265.6.
DR GeneID; 101903701; -.
DR KEGG; bta:101903701; -.
DR CTD; 166815; -.
DR VEuPathDB; HostDB:ENSBTAG00000015265; -.
DR VGNC; VGNC:35864; TIGD2.
DR eggNOG; KOG3105; Eukaryota.
DR GeneTree; ENSGT00940000162273; -.
DR HOGENOM; CLU_018294_1_1_1; -.
DR InParanoid; G3N133; -.
DR OMA; QWFDSQS; -.
DR OrthoDB; 2967227at2759; -.
DR TreeFam; TF101131; -.
DR Proteomes; UP000009136; Chromosome 6.
DR Bgee; ENSBTAG00000015265; Expressed in oocyte and 105 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR InterPro; IPR007889; HTH_Psq.
DR PANTHER; PTHR19303:SF22; TIGGER TRANSPOSABLE ELEMENT-DERIVED PROTEIN 2; 1.
DR PANTHER; PTHR19303; TRANSPOSON; 1.
DR Pfam; PF04218; CENP-B_N; 1.
DR Pfam; PF03184; DDE_1; 1.
DR Pfam; PF03221; HTH_Tnp_Tc5; 1.
DR SMART; SM00674; CENPB; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51253; HTH_CENPB; 1.
DR PROSITE; PS50960; HTH_PSQ; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00320};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00320};
KW Reference proteome {ECO:0000313|Proteomes:UP000009136}.
FT DOMAIN 1..52
FT /note="HTH psq-type"
FT /evidence="ECO:0000259|PROSITE:PS50960"
FT DOMAIN 67..139
FT /note="HTH CENPB-type"
FT /evidence="ECO:0000259|PROSITE:PS51253"
FT DNA_BIND 28..48
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00320"
FT REGION 442..474
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 451..474
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 525 AA; 59652 MW; 5700A6AEFEDD2FDD CRC64;
MLGKRKRVVL TIKDKLDIIK KLEEGISFKK LSVVYGIGES TVRDIKKNKE RIINYANSSD
PTSGVSKRKS MKSSTYEELD RVMIEWFNQQ KTDGIPVSGT ICAKQAKFFF DALGMEGDFN
ASSGWLTRFK QRHGIPKAAG KGTKLKGDET AASEFCGNFQ EFVERENLQP EQIYGADQTG
LFWKCLPSRT LALETEQSSS GYRSSRERII IMCCANATGL HKLNLCVVGK AKKPRAFKGA
DLSNLPVTYF SQKSAWIEHS VFRQWFEKYF VPQVQKHLKS KGLLEKAVLL LDFPPAHPNE
ELLSSDDGRI IVKYLPPNVT SLIQPMSQGV LATVKRYYRA GLLQKYMDEG TDPRMFWKNL
TVLDAIYEVS RAWNMIKSST ITKAWKKLFP GTEENSGMNI DEGAILAANL ATVLQNTEDC
EHVDLENIDQ WFDSRSNDSS CQVLTDSEGV EDQARPAETK PSSKTRKTEL NPEKHISHKA
ALEWTENLLD YLEQQDDMLL SDKLVLRRLR TIIRRKQKIQ NNKSH
//
