GenomeNet

Database: UniProt
Entry: G3SYB4_LOXAF
LinkDB: G3SYB4_LOXAF
Original site: G3SYB4_LOXAF 
ID   G3SYB4_LOXAF            Unreviewed;       936 AA.
AC   G3SYB4;
DT   16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT   16-NOV-2011, sequence version 1.
DT   24-JAN-2024, entry version 66.
DE   SubName: Full=GTF2I repeat domain containing 1 {ECO:0000313|Ensembl:ENSLAFP00000005462.3};
GN   Name=GTF2IRD1 {ECO:0000313|Ensembl:ENSLAFP00000005462.3};
OS   Loxodonta africana (African elephant).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.
OX   NCBI_TaxID=9785 {ECO:0000313|Ensembl:ENSLAFP00000005462.3, ECO:0000313|Proteomes:UP000007646};
RN   [1] {ECO:0000313|Ensembl:ENSLAFP00000005462.3, ECO:0000313|Proteomes:UP000007646}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000005462.3,
RC   ECO:0000313|Proteomes:UP000007646};
RA   Di Palma F., Heiman D., Young S., Johnson J., Lander E.S., Lindblad-Toh K.;
RT   "The Genome Sequence of Loxodonta africana (African elephant).";
RL   Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLAFP00000005462.3}
RP   IDENTIFICATION.
RC   STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000005462.3};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   STRING; 9785.ENSLAFP00000005462; -.
DR   Ensembl; ENSLAFT00000006508.3; ENSLAFP00000005462.3; ENSLAFG00000006505.3.
DR   eggNOG; ENOG502QPVX; Eukaryota.
DR   GeneTree; ENSGT00940000159414; -.
DR   HOGENOM; CLU_014412_0_0_1; -.
DR   InParanoid; G3SYB4; -.
DR   OMA; ERHSVRF; -.
DR   TreeFam; TF352524; -.
DR   Proteomes; UP000007646; Unassembled WGS sequence.
DR   GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR   GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR   GO; GO:0001227; F:DNA-binding transcription repressor activity, RNA polymerase II-specific; IEA:Ensembl.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IEA:Ensembl.
DR   GO; GO:0006366; P:transcription by RNA polymerase II; IEA:InterPro.
DR   GO; GO:0014886; P:transition between slow and fast fiber; IEA:Ensembl.
DR   Gene3D; 3.90.1460.10; GTF2I-like; 4.
DR   InterPro; IPR004212; GTF2I.
DR   InterPro; IPR036647; GTF2I-like_rpt_sf.
DR   InterPro; IPR016659; TF_II-I.
DR   PANTHER; PTHR46304; GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1; 1.
DR   PANTHER; PTHR46304:SF1; GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF02946; GTF2I; 4.
DR   PIRSF; PIRSF016441; TF_II-I; 1.
DR   SUPFAM; SSF117773; GTF2I-like repeat; 4.
DR   PROSITE; PS51139; GTF2I; 4.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007646};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   REGION          95..116
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          436..533
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          616..635
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          650..669
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        95..109
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   936 AA;  103957 MW;  ED75289B5421E6A4 CRC64;
     MSLLGKRCDV PANGCGPDRW NPAFSHKDEI ITSLVSALDS MCSALSKLNA EVACVAVHDE
     SAFVVGTEKG RMFLNARKEL QSDFLRFCRG PPWKEPETEH PKKVQRGEGC GRSIPRSTLE
     HSSDVYLLRK MVEEMFDVLY SEALGKASVV PLPYERLLKE PGLLAVQGLP EGLAFRKPAE
     YDPKALMAIL EHSHRIRFKF KRPLEDGGRD SKAVVELNGV SLIPKGSRDC GLHGQAPKVP
     PQDLPPSATS TSVASFLYSA ALPSHAIREL KQEAPTCPLA PSDLGLGRPE PKVPAAHDFP
     DCCGQKPPGS GGPLIQNVQA SKRILFSIVH DKSEKWDAFI KETEDINTLR ECVQILFNSR
     YAEALGLDHM VPVPYRKIAC DPEAVEIVGI PDKIPFKRPC TYGVPKLKRI LEERHSIHFI
     IKRMFDERIF TGNKFTKDPT KLEPASPPED TSAETSHATI LDLAATARSD KGSIPEDCGP
     GTSGELGGLR PIKIEPEDPD IIQVTIPDPS PTSEEMTDSL PGHLPSEDSG YGMEMLTDEL
     PRRNPWTVQK PAQANPGSAS HRPLRHQVSL TFKTPDAMLQ MASEALKCYY ILFIXPRETC
     FCGGASERAS PLRRRPMCFG DRPTSPKISG GPATTFQFGH QRRPELLTEG VKEPVTESQE
     RDSGDPFVDE SLKRQGFQEN YDARLSRIDI ANTLREQVQD LFNKKYGEAL GIKYPVQVPY
     KRIKSNPGSV IIEGLPPGIP FRKPCTFGSQ NLERILAVAD KIKFTVTRPF QGLIPKPDED
     DANRLGEKVI LREQVKELFN EKYGEALGLN RPVLVPYKLI RDSPDAVEVM GLPDDIPFRN
     PNTYDIHRLE KILKAREHVR MVVINQLQPF AEICNDTKVP AKDGSIPKRK RKRVSEGNSA
     NLESVASTNQ ISLVQWPMYM VDYAGLNVQL PGPLNY
//
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