ID G3T9F6_LOXAF Unreviewed; 1803 AA.
AC G3T9F6;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 27-MAR-2024, entry version 74.
DE SubName: Full=Collagen type XI alpha 1 chain {ECO:0000313|Ensembl:ENSLAFP00000010412.3};
GN Name=COL11A1 {ECO:0000313|Ensembl:ENSLAFP00000010412.3};
OS Loxodonta africana (African elephant).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.
OX NCBI_TaxID=9785 {ECO:0000313|Ensembl:ENSLAFP00000010412.3, ECO:0000313|Proteomes:UP000007646};
RN [1] {ECO:0000313|Ensembl:ENSLAFP00000010412.3, ECO:0000313|Proteomes:UP000007646}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000010412.3,
RC ECO:0000313|Proteomes:UP000007646};
RA Di Palma F., Heiman D., Young S., Johnson J., Lander E.S., Lindblad-Toh K.;
RT "The Genome Sequence of Loxodonta africana (African elephant).";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLAFP00000010412.3}
RP IDENTIFICATION.
RC STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000010412.3};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR STRING; 9785.ENSLAFP00000010412; -.
DR Ensembl; ENSLAFT00000012460.3; ENSLAFP00000010412.3; ENSLAFG00000012448.3.
DR eggNOG; KOG3544; Eukaryota.
DR GeneTree; ENSGT00940000154535; -.
DR HOGENOM; CLU_001074_2_1_1; -.
DR InParanoid; G3T9F6; -.
DR OMA; CDTPHKD; -.
DR TreeFam; TF323987; -.
DR Proteomes; UP000007646; Unassembled WGS sequence.
DR GO; GO:0005592; C:collagen type XI trimer; IEA:Ensembl.
DR GO; GO:0005201; F:extracellular matrix structural constituent; IEA:InterPro.
DR GO; GO:0001502; P:cartilage condensation; IEA:Ensembl.
DR GO; GO:0002063; P:chondrocyte development; IEA:Ensembl.
DR GO; GO:0030199; P:collagen fibril organization; IEA:Ensembl.
DR GO; GO:0050910; P:detection of mechanical stimulus involved in sensory perception of sound; IEA:Ensembl.
DR GO; GO:0048704; P:embryonic skeletal system morphogenesis; IEA:Ensembl.
DR GO; GO:0035987; P:endodermal cell differentiation; IEA:Ensembl.
DR GO; GO:0042472; P:inner ear morphogenesis; IEA:Ensembl.
DR GO; GO:0006029; P:proteoglycan metabolic process; IEA:Ensembl.
DR GO; GO:0035989; P:tendon development; IEA:Ensembl.
DR GO; GO:0055010; P:ventricular cardiac muscle tissue morphogenesis; IEA:Ensembl.
DR GO; GO:0007601; P:visual perception; IEA:Ensembl.
DR CDD; cd00110; LamG; 1.
DR Gene3D; 2.60.120.1000; -; 1.
DR Gene3D; 2.60.120.200; -; 1.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR000885; Fib_collagen_C.
DR InterPro; IPR001791; Laminin_G.
DR InterPro; IPR048287; TSPN-like_N.
DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24023:SF42; COLLAGEN ALPHA-1(XI) CHAIN; 1.
DR Pfam; PF01410; COLFI; 1.
DR Pfam; PF01391; Collagen; 8.
DR Pfam; PF02210; Laminin_G_2; 1.
DR SMART; SM00038; COLFI; 1.
DR SMART; SM00282; LamG; 1.
DR SMART; SM00210; TSPN; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR PROSITE; PS51461; NC1_FIB; 1.
PE 4: Predicted;
KW Extracellular matrix {ECO:0000256|ARBA:ARBA00022530};
KW Reference proteome {ECO:0000313|Proteomes:UP000007646};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Secreted {ECO:0000256|ARBA:ARBA00022530};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 1574..1802
FT /note="Fibrillar collagen NC1"
FT /evidence="ECO:0000259|PROSITE:PS51461"
FT REGION 435..513
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 527..1542
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 679..711
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 769..783
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 904..940
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1123..1137
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1214..1228
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1288..1321
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1339..1360
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1490..1506
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1526..1542
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1803 AA; 181237 MW; EF7285AE0760B42D CRC64;
MERWSSRWKT KRWLWDFTVT TLALTFLFQA REVRGAAPVD VLKALDFHNS PEGISKTTGF
CTNRKNSEGS DIAYRVSKQA QLSAPTKQLF PGGPFPEDFS ILFTVKPKKG IQSFLLSIYN
EHGIQQIGVE VGRSPVFLFE DHTGKPAPED YPLFRTVNIA DGKWHRVAIS VEKKTVTMIV
DCKKKTTKPL DRSERAIVDT NGITVFGTRI LDEEVFEGDI QQLLITGDPK AAYDYCEHYS
PDCDSSAPKA AQAQEPQIDE YAPEDIMEYD YEYGEADYKE AESVTERPTV TEETIAQTEA
NIIDDFQEYN YGTMESYQTE APRRVSGTNE PNPVEDVFTE EYLTGEDYDS QRKNSEDTLY
ENKGIDGRDS DLLVDGDLGE YDFYEYKEYE DKPTIPTIEE FGPGVPAETD ITETSINGHG
AYGEKGQKGE PAVVEPGMLV EGPPGPAGPA GIMGPPGLQG PTGPPGDPGD RGLPGRPGLP
GADGLPGPPG TMLMLPFRYG GDGSKGPTVS AQEAQAQAIL QQARIALRGP PGPMGLTGRP
GPVGGPGLSG AKGESGDPGP QGPRGVQGPP GPTGKPGKRG RPGADGSRGM PGEPGAKGDR
GFDGLPGLPG DKGHRGERGP QGPPGAPGED GMRGEDGEIG PRGLPGEAGP RGLLGPRGTP
GPTGHPALSF ISLPFNPKGP QGEPGPPGQQ GNPGPQGLPG PQGPIGPPGE KGPQGKPGLA
GLAGADGPPG HPGKEGQSGE KGALGPPGPQ GPIGYPGPRG VKGADGVRGL KGSKGEKGED
GFPGFKGDMG LKGDRGEVGQ VGPRGEDGPE GPKGRAGPTG DPGPSGQAGE KGKLGVPGLP
GYPGRQGPKG STGFPGFPGA NGEKGARGVA GKPGPRGQRG PTGPRGSRGA RGPTGKPGPK
GTSGGDGPPG PPGERGPQGP QGPVGFPGPK GPPGPPGKDG LPGHPGQRGE TGFQGKTGPP
GPGGVVGPQG PTGETGPIGE RGHPGPPGPP GEQGLPGAAG KEGAKGDPGP QGVSGKDGPA
GLRGFPGERG LPGAQGAAGL KGGEGPQGPP GPVGSPGERG SAGTAGPIGL PGRPGPQGPP
GPAGEKGAPG EKGPQGPAGR DGVQGPVGLP GPAGPAGSPG EDGDKGEIGE PGQKGSKGDK
GENGPPGPPG LQGPVGAPGI AGGDGEPGPR GQQGMFGQKG DEGARGFPGP PGPIGLQGLP
GPPGEKGENG DVGPMGPPGP PGPRGPQGPN GADGPQGPPG SIGSVGGVGE KGEPGEAGNP
GPPGEAGSGG PKGERGEKGE AGPPGAAGPP GAKGPPGDDG PKGNPGPVGF PGDPGPPGEP
GPAGQDGIGG DKGEDGDPGQ PGPPGPSGEA GPPGPPGKRG PPGATGSEGR QGEKGAKGEA
GAEGPPGKTG PVGPQGPSGK PGPEGLRGIP GPVGEQGLPG AAGQDGPPGP MGPPGLPGLK
GDPGSKGEKG HPGLIGLIGP PGEQGEKGDR GLPGTQGSPG VKGDGGIPGP AGPLGPPGPP
GLPGPQGPKG NKGSTGPAGQ KGDSGLPGPP GPPGPPGEVI QPLPILAPKK TRRHTEGMQA
DAGDNILDYS DGMEEIFGSL NSLKQDIEHM KFPMGTQTNP ARTCKDLQLS HPDFPDGEYW
VDPNQGCSGD SFKVYCNFTS GGETCIYPDK KSEGVRISSW PKEKPGSWFS EFKRGKLFSY
LDIEGNSINM VQMTFLKLLT ATARQNFTYH CHQSAAWYDM SSGSYDRALR FLGSNDEEMS
YDNNPYIKAL HDGCASRKGY EKTVIEINTP KINQVPIVDV MINDFGDQNQ KFGFEVGPVC
FLG
//
