GenomeNet

Database: UniProt
Entry: G3U233_LOXAF
LinkDB: G3U233_LOXAF
Original site: G3U233_LOXAF 
ID   G3U233_LOXAF            Unreviewed;      1213 AA.
AC   G3U233;
DT   16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT   16-NOV-2011, sequence version 1.
DT   27-MAR-2024, entry version 74.
DE   SubName: Full=Nuclear receptor binding SET domain protein 3 {ECO:0000313|Ensembl:ENSLAFP00000021891.1};
GN   Name=NSD3 {ECO:0000313|Ensembl:ENSLAFP00000021891.1};
OS   Loxodonta africana (African elephant).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.
OX   NCBI_TaxID=9785 {ECO:0000313|Ensembl:ENSLAFP00000021891.1, ECO:0000313|Proteomes:UP000007646};
RN   [1] {ECO:0000313|Ensembl:ENSLAFP00000021891.1, ECO:0000313|Proteomes:UP000007646}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000021891.1,
RC   ECO:0000313|Proteomes:UP000007646};
RA   Di Palma F., Heiman D., Young S., Johnson J., Lander E.S., Lindblad-Toh K.;
RT   "The Genome Sequence of Loxodonta africana (African elephant).";
RL   Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLAFP00000021891.1}
RP   IDENTIFICATION.
RC   STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000021891.1};
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   AlphaFoldDB; G3U233; -.
DR   Ensembl; ENSLAFT00000028853.1; ENSLAFP00000021891.1; ENSLAFG00000014727.4.
DR   GeneTree; ENSGT00940000155355; -.
DR   Proteomes; UP000007646; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0042054; F:histone methyltransferase activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   CDD; cd15649; PHD1_NSD3; 1.
DR   CDD; cd15652; PHD2_NSD3; 1.
DR   CDD; cd15658; PHD4_NSD3; 1.
DR   CDD; cd15661; PHD5_NSD3; 1.
DR   CDD; cd20163; PWWP_NSD3_rpt1; 1.
DR   CDD; cd20166; PWWP_NSD3_rpt2; 1.
DR   CDD; cd19212; SET_NSD3; 1.
DR   Gene3D; 2.30.30.140; -; 2.
DR   Gene3D; 2.170.270.10; SET domain; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 4.
DR   InterPro; IPR006560; AWS_dom.
DR   InterPro; IPR041306; C5HCH.
DR   InterPro; IPR047456; PHD2_NSD3.
DR   InterPro; IPR047458; PHD4_NSD3.
DR   InterPro; IPR047527; PHD5_NSD3.
DR   InterPro; IPR003616; Post-SET_dom.
DR   InterPro; IPR000313; PWWP_dom.
DR   InterPro; IPR047451; PWWP_NSD3_rpt1.
DR   InterPro; IPR047453; PWWP_NSD3_rpt2.
DR   InterPro; IPR001214; SET_dom.
DR   InterPro; IPR046341; SET_dom_sf.
DR   InterPro; IPR047461; SET_NSD3.
DR   InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR   InterPro; IPR011011; Znf_FYVE_PHD.
DR   InterPro; IPR001965; Znf_PHD.
DR   InterPro; IPR019787; Znf_PHD-finger.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR22884:SF473; HISTONE-LYSINE N-METHYLTRANSFERASE NSD3; 1.
DR   PANTHER; PTHR22884; SET DOMAIN PROTEINS; 1.
DR   Pfam; PF17907; AWS; 1.
DR   Pfam; PF17982; C5HCH; 1.
DR   Pfam; PF00855; PWWP; 2.
DR   Pfam; PF00856; SET; 1.
DR   SMART; SM00570; AWS; 1.
DR   SMART; SM00249; PHD; 5.
DR   SMART; SM00508; PostSET; 1.
DR   SMART; SM00293; PWWP; 2.
DR   SMART; SM00317; SET; 1.
DR   SUPFAM; SSF57903; FYVE/PHD zinc finger; 3.
DR   SUPFAM; SSF82199; SET domain; 1.
DR   SUPFAM; SSF63748; Tudor/PWWP/MBT; 2.
DR   PROSITE; PS51215; AWS; 1.
DR   PROSITE; PS50868; POST_SET; 1.
DR   PROSITE; PS50812; PWWP; 2.
DR   PROSITE; PS50280; SET; 1.
DR   PROSITE; PS01359; ZF_PHD_1; 1.
DR   PROSITE; PS50016; ZF_PHD_2; 3.
PE   4: Predicted;
KW   Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW   Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007646};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00146}.
FT   TRANSMEM        64..90
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          114..179
FT                   /note="PWWP"
FT                   /evidence="ECO:0000259|PROSITE:PS50812"
FT   DOMAIN          552..599
FT                   /note="PHD-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50016"
FT   DOMAIN          715..759
FT                   /note="PHD-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50016"
FT   DOMAIN          764..826
FT                   /note="PWWP"
FT                   /evidence="ECO:0000259|PROSITE:PS50812"
FT   DOMAIN          897..947
FT                   /note="AWS"
FT                   /evidence="ECO:0000259|PROSITE:PS51215"
FT   DOMAIN          949..1066
FT                   /note="SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50280"
FT   DOMAIN          1073..1089
FT                   /note="Post-SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50868"
FT   DOMAIN          1125..1172
FT                   /note="PHD-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50016"
FT   REGION          189..211
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          247..314
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          838..865
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        194..211
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        247..265
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        266..287
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        288..307
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1213 AA;  137215 MW;  B67D475B63239AD2 CRC64;
     PQTVIPKKTG SPEIKLKITK TIQNGRELFE SSLCGDLLNE VQASEHTKSK HESRKEKRKK
     RIRILRYNSF SSSQLVFVIL CCLLISPLSF ELKAAKQALP HTGRDQLILV HYNVGDLVWS
     KVGTYPWWPC MVSSDPQLEV HTKINTREKS AREYHVQFFS NQPERAWVHE KRVREYKGHE
     QYEELLAEAT KQASNHSEKQ KIRKPRPQRE RAQWDIGIAH AEKALKMTRE ERIEQYTFIY
     IDKQPEAKKN VASKAEVKKT RRPRSVPNTQ TEQTNTGEAA SSPSSTEIRR HSQRRHTSVE
     EEEPPPVTEK TWGLPLFKKK NVERGDGGRG GRRGMLNSTP LSKIKLILMQ IFYFCFLTEL
     LFSSPDNFGA NYEDYLGSPG TEYNKSLKSQ INGLYHLLGS VEKKQQRRSI RTRSESEKST
     EVVPKKKIKK EQVGFLHTEN FTQKMGLASD FRYISNQSSL LRLIAVKSFC ASEISDSCKP
     LKKRSRASTD VEMTSSAYRD TSDSDSRGLS DLQVSFGKQV DSPSATADVD ISDVQSVDSS
     LSRSSFGMTK KDAVCQICES TGDSLIPCEG ECCKHFHLEC LGLASLPDGK FICMECQTGQ
     HPCFSCKVSG TDVKRCSVGT CGKFYHETCV RKFPTAIFES KGFRCPQHCC SACSMENPEK
     PNSKIGRMMR CLRCPVAYHS GDACIAAGSI FVSSYVLICS NHSKRSSNSS SAVNVGFCFV
     CARGGRLLCC ESCPASFHPE CLGIGMPEGC WNCDDCKAGR KLHYKQIVWV KLGNYRWWPA
     ETCNPRSVPL NIQGLKHDLG DFPVFFFGSH DYYWVHQGRV FPYVEGDKSF AEGQTSINKT
     FKKALEEAAK RFQELKAQRE SKEALEIEKN SRKPPPYKHI KANKVVGKVQ IQVADLSEIP
     RCNCKPADEN PCGLESECLN RMLQYECHPQ VCPAGDRCQN QCFTKRLYPD AEIIKTERRG
     WGLRTKRSIK KGEFVNEYVG ELIDEEECRL RIKRAHENSV TNFYMLTVTK DRIIDAGPKG
     NYSRFMNHSC NPNCETQKWT VNGDVRVGLF ALCDIPAGME LTFNYNLDCL GNGRTECHCG
     ADNCSGFLGV RPKSACASTT EEKARNAKLK QKRRKIKTEP KQMHEDYCFQ CGDGGELVMC
     DKKDCPKAYH LICLNLTQPP YGKWECPWHQ CDECSSSAAS FCEFCPHSFC KDHEKGALVP
     SALEGRLCCS EHD
//
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