ID G7I449_MEDTR Unreviewed; 384 AA.
AC G7I449;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=PIF1-like helicase {ECO:0000313|EMBL:AES62030.1};
GN Name=11415194 {ECO:0000313|EnsemblPlants:AES62030};
GN OrderedLocusNames=MTR_1g092930 {ECO:0000313|EMBL:AES62030.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES62030.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES62030.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES62030.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES62030,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES62030.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES62030,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES62030}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES62030};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR EMBL; CM001217; AES62030.1; -; Genomic_DNA.
DR RefSeq; XP_003591779.1; XM_003591731.1.
DR AlphaFoldDB; G7I449; -.
DR STRING; 3880.G7I449; -.
DR PaxDb; 3880-AES62030; -.
DR EnsemblPlants; AES62030; AES62030; MTR_1g092930.
DR GeneID; 11408488; -.
DR Gramene; AES62030; AES62030; MTR_1g092930.
DR KEGG; mtr:11408488; -.
DR eggNOG; KOG0987; Eukaryota.
DR HOGENOM; CLU_718379_0_0_1; -.
DR OMA; MSEPNDG; -.
DR OrthoDB; 980706at2759; -.
DR Proteomes; UP000002051; Chromosome 1.
DR GO; GO:0005657; C:replication fork; IBA:GO_Central.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0032508; P:DNA duplex unwinding; IBA:GO_Central.
DR GO; GO:0006260; P:DNA replication; IBA:GO_Central.
DR CDD; cd04480; RPA1_DBD_A_like; 1.
DR CDD; cd18809; SF1_C_RecD; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR049163; Pif1-like_2B_dom.
DR InterPro; IPR003871; RPA1_DBD-A-like_plant.
DR PANTHER; PTHR23274:SF49; ATP-DEPENDENT DNA HELICASE; 1.
DR PANTHER; PTHR23274; DNA HELICASE-RELATED; 1.
DR Pfam; PF21530; Pif1_2B_dom; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000313|EMBL:AES62030.1};
KW Helicase {ECO:0000313|EMBL:AES62030.1};
KW Hydrolase {ECO:0000313|EMBL:AES62030.1};
KW Nucleotide-binding {ECO:0000313|EMBL:AES62030.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 220..266
FT /note="DNA helicase Pif1-like 2B"
FT /evidence="ECO:0000259|Pfam:PF21530"
SQ SEQUENCE 384 AA; 43634 MW; 62905C1CEB3CCC34 CRC64;
MAGPFDTVKG VNTTKEEWKI GVRITDMWIV TNMNNHQHLE MVLMDTKGDK IQAIIVKDDI
AKWGSILIEQ KTYVMQNFKV LNNDLQIKLC DHPCKIIIHG RSVIYEHPFP DIPLTKVEFK
TFSQVLTRKM SEPNDGYAEV DTSPGDPIDA IVQSTYPDLL SQYNNEQYLQ SRAILTYTNE
VVDQINDYVL KLIPGEGREY YSADRSKMND VGAFDAIPPE FLNTIKTSDL PNHKFTLKIG
TPVMLLKDLD LFEGFRNGTR LIVTRLGRFV LQAKSISGNN IGELVLIPRL DMSPSQSKLP
FKLVRRQFPI VVSYAMTINK SQGHSFDNVG LYLPKPRFSN GQLCTTFSRV KSKQGLETLI
HDKEKREMSS TTNLGGLRRG FLNL
//
