ID G7IL74_MEDTR Unreviewed; 427 AA.
AC G7IL74;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=Tubby-like F-box protein {ECO:0000256|RuleBase:RU361125};
GN Name=11434330 {ECO:0000313|EnsemblPlants:AES63362};
GN OrderedLocusNames=MTR_2g007930 {ECO:0000313|EMBL:AES63362.1};
GN ORFNames=MtrunA17_Chr2g0278511 {ECO:0000313|EMBL:RHN71592.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES63362.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES63362.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES63362.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES63362,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES63362.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES63362,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES63362}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES63362};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|EMBL:RHN71592.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN71592.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
CC -!- SIMILARITY: Belongs to the TUB family. {ECO:0000256|ARBA:ARBA00007129,
CC ECO:0000256|RuleBase:RU361125}.
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DR EMBL; CM001218; AES63362.1; -; Genomic_DNA.
DR EMBL; PSQE01000002; RHN71592.1; -; Genomic_DNA.
DR RefSeq; XP_003593111.1; XM_003593063.2.
DR AlphaFoldDB; G7IL74; -.
DR STRING; 3880.G7IL74; -.
DR PaxDb; 3880-AES63362; -.
DR EnsemblPlants; AES63362; AES63362; MTR_2g007930.
DR GeneID; 11434330; -.
DR Gramene; AES63362; AES63362; MTR_2g007930.
DR KEGG; mtr:11434330; -.
DR eggNOG; KOG2502; Eukaryota.
DR HOGENOM; CLU_028236_3_0_1; -.
DR OMA; IVQNSRW; -.
DR OrthoDB; 603296at2759; -.
DR Proteomes; UP000002051; Chromosome 2.
DR Proteomes; UP000265566; Chromosome 2.
DR ExpressionAtlas; G7IL74; differential.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR CDD; cd22153; F-box_AtTLP-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR025659; Tubby-like_C.
DR InterPro; IPR000007; Tubby_C.
DR InterPro; IPR018066; Tubby_C_CS.
DR PANTHER; PTHR16517:SF171; TUBBY-LIKE F-BOX PROTEIN 10; 1.
DR PANTHER; PTHR16517; TUBBY-RELATED; 1.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF01167; Tub; 1.
DR PRINTS; PR01573; SUPERTUBBY.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF54518; Tubby C-terminal domain-like; 1.
DR PROSITE; PS01200; TUB_1; 1.
DR PROSITE; PS01201; TUB_2; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 54..98
FT /note="F-box"
FT /evidence="ECO:0000259|Pfam:PF12937"
FT DOMAIN 115..422
FT /note="Tubby C-terminal"
FT /evidence="ECO:0000259|Pfam:PF01167"
SQ SEQUENCE 427 AA; 47919 MW; 723FB535C2DB77D0 CRC64;
MSFRSIVRDV RDSFGSLSRR SFDVKLTGHH HRGKSHGSVQ DLHDQPLVIQ NSCWANLPPE
LLFDVIRRLE ESENTWPSRK HVVACASVCQ SWRNMCKDIV RSPEFCGKLT FPVSLKQPGP
RDGIIQCFIK RDKSNLTYHL FLCLSPALLV ENGKFLLSAK RTRRTTYTEY VISMDADNIS
RSSNTYIGKL RSNFLGTKFI IYDTQPPCTS AHICPPGTGK TSRRFSKKVS PKVPSGSYNI
AQVTYELNVL GTRGPRKMHC IMHSIPNSAL DAGGSVPGQP ELIHRSLEDS FRSISFSKSL
DHSIEFSSAR FSEIGGSCNE DDDGKMRPLV LKNKPPRWHE QLQCWCLNFR GRVTVASVKN
FQLIASTQPP AGAPTPSQPA PPEHDKIILQ FGKVGKDMFT MDYRYPLSAF QAFAICLSSF
DTKLACE
//
