ID G7IR59_MEDTR Unreviewed; 688 AA.
AC G7IR59; A0A0C3V5V0;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 2.
DT 24-JAN-2024, entry version 66.
DE SubName: Full=Embryo sac development arrest protein {ECO:0000313|EMBL:AES66740.2};
DE SubName: Full=Putative transcription factor WD40-like family {ECO:0000313|EMBL:RHN75194.1};
GN Name=11405313 {ECO:0000313|EnsemblPlants:AES66740};
GN OrderedLocusNames=MTR_2g081080 {ECO:0000313|EMBL:AES66740.2};
GN ORFNames=MtrunA17_Chr2g0318511 {ECO:0000313|EMBL:RHN75194.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES66740.2, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES66740.2, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES66740.2}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES66740,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES66740.2, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES66740,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES66740}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES66740};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|EMBL:RHN75194.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN75194.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the WD repeat NOL10/ENP2 family.
CC {ECO:0000256|ARBA:ARBA00005264}.
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DR EMBL; CM001218; AES66740.2; -; Genomic_DNA.
DR EMBL; PSQE01000002; RHN75194.1; -; Genomic_DNA.
DR RefSeq; XP_003596489.2; XM_003596441.2.
DR AlphaFoldDB; G7IR59; -.
DR STRING; 3880.G7IR59; -.
DR EnsemblPlants; AES66740; AES66740; MTR_2g081080.
DR GeneID; 11405313; -.
DR Gramene; AES66740; AES66740; MTR_2g081080.
DR KEGG; mtr:11405313; -.
DR eggNOG; KOG2321; Eukaryota.
DR HOGENOM; CLU_009923_0_2_1; -.
DR OrthoDB; 152730at2759; -.
DR Proteomes; UP000002051; Chromosome 2.
DR Proteomes; UP000265566; Chromosome 2.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR040382; NOL10/Enp2.
DR InterPro; IPR012580; NUC153.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR14927:SF0; NUCLEOLAR PROTEIN 10; 1.
DR PANTHER; PTHR14927; UNCHARACTERIZED; 1.
DR Pfam; PF08159; NUC153; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574}.
FT DOMAIN 502..529
FT /note="NUC153"
FT /evidence="ECO:0000259|Pfam:PF08159"
FT REGION 473..493
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 547..578
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 608..688
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 559..578
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 641..659
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 688 AA; 77302 MW; 3B4933418B5A7A97 CRC64;
MATSDGGIKS TSINGVKVYT IASQQPSLAS WIPTKKQQSH RPIKSYTQNV QLIEDLRFTT
ATTKIKATPD GEFIIASGIY PPQVKVYEVR ELGLKFERHL DSEIVDFQVL SDDYSKLAFL
CADRSINLHA KYGKHYSLRI PRMGRDITYD DWSCDLLCAA SSPDLYRINL EQGRFLSSLT
TQSPALNVVC RSKVHGLVAC GGEDGAVECF DPRVRSSVGR IDAVGPSGDV DQEVTALEFD
GDGDFLMAVG SSAGKVLIYD LRSSRPVRIQ DHMYGSSILD IKWHRTLNFE GPKLITSDKH
VVRIWDPDTG ESLTSIEPTT GEINDVCTFP GSGLILLALD CSQIPSYIIP SLGPVPKWCS
SLENFTEELE MGGQTTIYDH YKFLTKEELD KLNLTHLIGT NVLRAYMHGF FINYKLYKKA
EDLAGTSNAE NYIEQRKREK LEAERASRIT IKRKLPKVNR LLAARLLESE DVENEKRDAV
EDVETKKASK KKKGLSMQDL EDDRFKAIFT NKEFEIKEDS EEYLALHPMG AKKQTSLLKE
HFEPVMSDDD LSLGEDDASE DEPANKTNEK TRVPRMYEIK DEQHAEAFWS RKSIADEESL
PMGDRVEALK NEQQSSHIPR GVKRGPGGSR EITFTSRNRA TYNEDDIDKK VEPRKKRGVQ
SLGLKSQGPV FNGRGRGRGR GGRGRGRR
//
