ID G7J944_MEDTR Unreviewed; 973 AA.
AC G7J944;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE SubName: Full=Pentatricopeptide (PPR) repeat protein {ECO:0000313|EMBL:AES73485.1};
GN Name=11442245 {ECO:0000313|EnsemblPlants:AES73485};
GN OrderedLocusNames=MTR_3g105370 {ECO:0000313|EMBL:AES73485.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES73485.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES73485.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES73485.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES73485,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES73485.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES73485,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES73485}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES73485};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001219; AES73485.1; -; Genomic_DNA.
DR RefSeq; XP_003603234.1; XM_003603186.1.
DR AlphaFoldDB; G7J944; -.
DR PaxDb; 3880-AES73485; -.
DR EnsemblPlants; AES73485; AES73485; MTR_3g105370.
DR GeneID; 11442245; -.
DR Gramene; AES73485; AES73485; MTR_3g105370.
DR KEGG; mtr:11442245; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_0_1; -.
DR OMA; QIHANIV; -.
DR OrthoDB; 5489998at2759; -.
DR Proteomes; UP000002051; Chromosome 3.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 11.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 187..221
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 261..295
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 362..396
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 464..498
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 565..599
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 635..665
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 666..700
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 881..973
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 973 AA; 109246 MW; 97990DE8C0540B0A CRC64;
MSRKCSVSPS SLLPQWFSIL RHAIADSDLI LGKRTHAVIV TSGLNPDRYV TNNLITMYAK
CGSLFSARKL FDITPQSDRD LVTYNAILAA YAHTGELHDV EKTHEAFHIF RLLRQSVMLT
TRHTLSPLFK LCLLYGSPSA SEALQGYAVK IGLQWDVFVA GALVNIYAKF QRIREARVLF
DRMPVRDVVL WNVMMKAYVE MGAGDEVLGL FSAFHRSGLR PDCVSVRTIL MGVGKKTVFE
RELEQVRAYA TKLFVCDDDS DVTVWNKTLS SYLQAGEGWE AVDCFRDMIK SRVPCDSLTY
IVILSVVASL NHLELGKQIH GAVVRFGWDQ FVSVANSAIN MYVKAGSVNY ARRMFGQMKE
VDLISWNTVI SGCARSGLEE CSLRLFIDLL RSGLLPDQFT ITSVLRACSS LEESYCVGRQ
VHTCALKAGI VLDSFVSTAL IDVYSKGGKM EEAELLFHNQ DGFDLASWNA MMHGFTVSDN
YREALRLFSL MHERGEKADQ ITFANAAKAA GCLVRLQQGK QIHAVVIKMR FHYDLFVISG
ILDMYLKCGE MKSARKVFNQ IPSPDDVAWT TVISGCVENG EEEQALFTYH QMRLAGVQPD
EYTFATLVKA CSLLTALEQG KQIHANIMKL NCAFDPFVMT SLVDMYAKCG NIEDAYGLFR
RMNTRSVALW NAMIVGLAQH GNAEEALNFF NEMKSRGVTP DRVTFIGVLS ACSHSGLTSD
AYKNFDSMQK TYGVEPEIEH YSCLVDALSR AGHIQEAEKV VSSMPFEASA TMYRTLLNAC
RVQGDKETGE RVAEKLFTMD PSDSAAYVLL SNIYAAANQW ENAVSARNMM KRVNVKKEPG
FSWIDMKNKV HLFVAGDRSH EETDLIYNKV EYVMKRIKEE GYVPDTEFAL VDIEEEDKES
ALSYHSEKLA IAYGLMKTPP STTLRVIKNL RVCGDCHNAI KYISNVFQRE IVLRDANRFH
HFRSGICSCG DYW
//
