ID G7JFI4_MEDTR Unreviewed; 1154 AA.
AC G7JFI4;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Autophagy-related protein {ECO:0000313|EMBL:AES92467.1};
GN Name=11428392 {ECO:0000313|EnsemblPlants:AES92467};
GN OrderedLocusNames=MTR_4g130370 {ECO:0000313|EMBL:AES92467.1};
GN ORFNames=MtrunA17_Chr4g0073631 {ECO:0000313|EMBL:RHN64858.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES92467.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES92467.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES92467.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES92467,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES92467.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES92467,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES92467}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES92467};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|EMBL:RHN64858.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN64858.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
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DR EMBL; CM001220; AES92467.1; -; Genomic_DNA.
DR EMBL; PSQE01000004; RHN64858.1; -; Genomic_DNA.
DR RefSeq; XP_003610270.1; XM_003610222.2.
DR AlphaFoldDB; G7JFI4; -.
DR STRING; 3880.G7JFI4; -.
DR PaxDb; 3880-AES92467; -.
DR EnsemblPlants; AES92467; AES92467; MTR_4g130370.
DR GeneID; 11428392; -.
DR Gramene; AES92467; AES92467; MTR_4g130370.
DR KEGG; mtr:11428392; -.
DR eggNOG; ENOG502QUG9; Eukaryota.
DR HOGENOM; CLU_007054_0_0_1; -.
DR OMA; GLRWYLI; -.
DR OrthoDB; 2727468at2759; -.
DR Proteomes; UP000002051; Chromosome 4.
DR Proteomes; UP000265566; Chromosome 4.
DR GO; GO:1990316; C:Atg1/ULK1 kinase complex; IBA:GO_Central.
DR GO; GO:0005776; C:autophagosome; IEA:EnsemblPlants.
DR GO; GO:0034045; C:phagophore assembly site membrane; IBA:GO_Central.
DR GO; GO:0060090; F:molecular adaptor activity; IBA:GO_Central.
DR GO; GO:0042803; F:protein homodimerization activity; IEA:EnsemblPlants.
DR GO; GO:0019901; F:protein kinase binding; IBA:GO_Central.
DR GO; GO:0000045; P:autophagosome assembly; IBA:GO_Central.
DR GO; GO:0010150; P:leaf senescence; IEA:EnsemblPlants.
DR GO; GO:0034727; P:piecemeal microautophagy of the nucleus; IBA:GO_Central.
DR GO; GO:0001934; P:positive regulation of protein phosphorylation; IBA:GO_Central.
DR GO; GO:0061709; P:reticulophagy; IBA:GO_Central.
DR InterPro; IPR040040; ATG11.
DR InterPro; IPR019460; Atg11_C.
DR InterPro; IPR045326; ATG17-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR13222; RB1-INDUCIBLE COILED-COIL; 1.
DR PANTHER; PTHR13222:SF1; RB1-INDUCIBLE COILED-COIL PROTEIN 1; 1.
DR Pfam; PF10377; ATG11; 1.
DR Pfam; PF04108; ATG17_like; 1.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
PE 4: Predicted;
KW Autophagy {ECO:0000256|ARBA:ARBA00023006};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 147..482
FT /note="Autophagy protein ATG17-like"
FT /evidence="ECO:0000259|Pfam:PF04108"
FT DOMAIN 1007..1140
FT /note="Autophagy-related protein 11 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10377"
FT REGION 90..126
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 751..788
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 652..679
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 833..895
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 984..1022
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 97..116
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 770..788
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1154 AA; 129934 MW; BCB1A89FE6E4A1F9 CRC64;
MSSSITGSSV NGSQLLVHIA ENGHSFELEC DENALVEAVM RSIESVTGIN FNDQLVLCSD
LKLEPQRPLS AYKLPSDEKE VFIFNKARLQ SNAHPPPPEQ VDVPENLEPP SPSSSHDPHP
LDDALDPALK ALPSYERQFR HHYHRGHAIY TGTSMKYEHC ERLLREQMVQ ERAVEVARCN
LDQYYRIINQ NYGDFMKRYM QQHRMHSDLL ANFGKDVEKL RSIKLHPALQ TVNHKCLLDL
VKEENLRKSV ENCTSSHKQF ENKMSQFKQS FGEVKHRVED LLTSGPFLAT KNLEQAIKEH
HRYINEQKSI MQSLSKDVNT VKKLVDDCLS SQLSSSLRPH DAVSALGPMY DVHDKNHLPK
MQACDRAISK LLEFCKEKKN EMNFFVHDYM QRITYVSYLI KDQKLQFPVF KEAMVRQDGL
FGDLKLFHSI GPSYRACLAE IVRRKASMKL YMGMAGQLAE RLATKRELEV SRRDDFMRVH
GSCIPRDVLS SMGLFDSPNQ CDVNIAPFDD GLLNIDISDV DRYAPEYIAG ATYRLEKHGS
YKSASGSISD SSHLAEAVDI SGNSFQKYDS EDLLDDSVLV EIAGTCKMEV ENAKLKAELA
ARIALICSLC PQIEYESLDD EKVGNILKNA TDKTAEALHL KDEYIKHVQS MLKMKQMQCG
SYEKRIQELE QKLSDQYVQG QKMSSVNDAA DFPLLAGSGK TDNCKSEYVS GEANMPSIST
TEPMDEVSCI SSSFDAKLGL FTERAGKSLD GVDENMLDSS GMQNPHLDSS MMEPHREEMQ
SSDKDKKDKI TGQLGLSLTN SSTAESMPLS HDLVPCGSLV CPDLGSKVND DKLLELQSAL
ADKSNQLNET DTKLKAVMEE VAVLKRELEA SRKLLDESQM NCAHLENCLH EAREEAQTQK
SSADRRASEY SLLRASVIKM RSFFERLKTC VYAPGGVPDF ADSLRNLAQS LANSANDRDD
DDIVEFRRCI RVLADKVGFL STHREEFHDK YTRMDAANEQ LRKELEEKTD QVKTYYNKLQ
LEKQANKEKI SFGCLEVHEI AAFVLTPSGH YEAITKKSSN YYYLSAESVA LFTDHLPSRP
NFIVGQIVHI EHQIVKSLPE HGRATTPDKG TTDWLTLNSG STPNPYGLPV GCEYFVVTVA
MLPDTAIRSS SPTS
//
