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Database: UniProt
Entry: G7K2Q4_MEDTR
LinkDB: G7K2Q4_MEDTR
Original site: G7K2Q4_MEDTR 
ID   G7K2Q4_MEDTR            Unreviewed;       578 AA.
AC   G7K2Q4;
DT   25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT   25-JAN-2012, sequence version 1.
DT   24-JAN-2024, entry version 52.
DE   SubName: Full=Carotenoid cleavage dioxygenase 4a-6 {ECO:0000313|EMBL:AES95417.1};
GN   Name=11416550 {ECO:0000313|EnsemblPlants:AES95417};
GN   OrderedLocusNames=MTR_5g025230 {ECO:0000313|EMBL:AES95417.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:AES95417.1, ECO:0000313|Proteomes:UP000002051};
RN   [1] {ECO:0000313|EMBL:AES95417.1, ECO:0000313|Proteomes:UP000002051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:AES95417.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:AES95417,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA   Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA   Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA   Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA   Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA   Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA   Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA   Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA   Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA   Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA   Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA   Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA   Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA   Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA   Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA   Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA   Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA   Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA   Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [2] {ECO:0000313|EMBL:AES95417.1, ECO:0000313|Proteomes:UP000002051}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES95417,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume Medicago
RT   truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [3] {ECO:0000313|EnsemblPlants:AES95417}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES95417};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- COFACTOR:
CC       Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC         Evidence={ECO:0000256|PIRSR:PIRSR604294-1};
CC       Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000256|PIRSR:PIRSR604294-1};
CC   -!- SIMILARITY: Belongs to the carotenoid oxygenase family.
CC       {ECO:0000256|ARBA:ARBA00006787}.
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DR   EMBL; CM001221; AES95417.1; -; Genomic_DNA.
DR   RefSeq; XP_003612459.1; XM_003612411.1.
DR   AlphaFoldDB; G7K2Q4; -.
DR   STRING; 3880.G7K2Q4; -.
DR   PaxDb; 3880-AES95417; -.
DR   EnsemblPlants; AES95417; AES95417; MTR_5g025230.
DR   GeneID; 11416550; -.
DR   Gramene; AES95417; AES95417; MTR_5g025230.
DR   KEGG; mtr:11416550; -.
DR   eggNOG; KOG1285; Eukaryota.
DR   HOGENOM; CLU_016472_0_0_1; -.
DR   OMA; IVMRMNI; -.
DR   OrthoDB; 318119at2759; -.
DR   Proteomes; UP000002051; Chromosome 5.
DR   GO; GO:0009570; C:chloroplast stroma; IBA:GO_Central.
DR   GO; GO:0010436; F:carotenoid dioxygenase activity; IBA:GO_Central.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0016121; P:carotene catabolic process; IBA:GO_Central.
DR   InterPro; IPR004294; Carotenoid_Oase.
DR   PANTHER; PTHR10543; BETA-CAROTENE DIOXYGENASE; 1.
DR   PANTHER; PTHR10543:SF46; CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED; 1.
DR   Pfam; PF03055; RPE65; 1.
PE   3: Inferred from homology;
KW   Dioxygenase {ECO:0000256|ARBA:ARBA00022964, ECO:0000313|EMBL:AES95417.1};
KW   Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|PIRSR:PIRSR604294-1};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|PIRSR:PIRSR604294-1};
KW   Oxidoreductase {ECO:0000256|ARBA:ARBA00022964,
KW   ECO:0000313|EMBL:AES95417.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT   REGION          31..62
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         277
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR604294-1"
FT   BINDING         326
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR604294-1"
FT   BINDING         391
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR604294-1"
FT   BINDING         563
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR604294-1"
SQ   SEQUENCE   578 AA;  64219 MW;  4F4C2BF9A9925054 CRC64;
     MVPKPIIILT TKQPPTIPIP QFNIAFVRTQ EKPQTSQPHE TLRTGSPAKT KTLLTSQKHK
     NTNKRLQTSS ISALILNTLD DIINTFIDPP IKPSVDPRHV LSQNFAPVLD ELPPTQCVII
     KGTLPPSLYG AYIRNGPNPQ FLPRGPYHLF DGDGMLHAIT ISNGKATLCS RYVKTYKYKI
     ENKAGHQLIP NVFSGFNSLI ALAARGSVVV ARVLTGQYNP SNGIGLVNTS LALFGNRLFA
     LGESDLPYEV KLTPNGDIQT MGRYDFNGKL LMSMTAHPKI DSDTSECFAF RYGPIRPFLT
     YFRFDSNGVK HNDVPVFSMK RPSFLHDFAI TKKYAVFADI QLEMNPLGMI FGGSPVRSDP
     SKVSRIGILP RYANDESKMK WFDVPGFNIM HTINAWDEED GGTVTLVATN ILSVQHVMER
     MDLIHAMIEK VRINVETGLV TRQPLSARNL DLAVINNDFL GKKSRFVYAA IGNPMPKFSG
     VVKIDVLKGE EVGCRLYGEG CYGGEPFFVA MEGGEEEDDG YLVSYVHDEK KGESKFLVMD
     AKSPEFEIVA EVKLPRRVPY GFHGLFVKQS DITKLSVS
//
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