ID G7L8A5_MEDTR Unreviewed; 1081 AA.
AC G7L8A5; A0A0C3XXT5;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 2.
DT 24-JAN-2024, entry version 48.
DE RecName: Full=Nuclear pore complex protein {ECO:0000256|RuleBase:RU365072};
GN Name=11418924 {ECO:0000313|EnsemblPlants:AET01826};
GN OrderedLocusNames=MTR_8g022010 {ECO:0000313|EMBL:AET01826.2};
GN ORFNames=MtrunA17_Chr8g0344521 {ECO:0000313|EMBL:RHN39505.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AET01826.2, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AET01826.2, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AET01826.2}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AET01826,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AET01826.2, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AET01826,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AET01826}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AET01826};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|Proteomes:UP000265566}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17 {ECO:0000313|Proteomes:UP000265566};
RX PubMed=30397259; DOI=10.1038/s41477-018-0286-7;
RA Pecrix Y., Staton S.E., Sallet E., Lelandais-Briere C., Moreau S.,
RA Carrere S., Blein T., Jardinaud M.F., Latrasse D., Zouine M., Zahm M.,
RA Kreplak J., Mayjonade B., Satge C., Perez M., Cauet S., Marande W.,
RA Chantry-Darmon C., Lopez-Roques C., Bouchez O., Berard A., Debelle F.,
RA Munos S., Bendahmane A., Berges H., Niebel A., Buitink J., Frugier F.,
RA Benhamed M., Crespi M., Gouzy J., Gamas P.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 4:1017-1025(2018).
RN [5] {ECO:0000313|EMBL:RHN39505.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN39505.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
CC -!- FUNCTION: Functions as a component of the nuclear pore complex (NPC).
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SUBUNIT: Part of the nuclear pore complex (NPC).
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000256|RuleBase:RU365072}. Nucleus membrane
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SIMILARITY: Belongs to the nucleoporin Nup84/Nup107 family.
CC {ECO:0000256|RuleBase:RU365072}.
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DR EMBL; CM001224; AET01826.2; -; Genomic_DNA.
DR EMBL; PSQE01000008; RHN39505.1; -; Genomic_DNA.
DR RefSeq; XP_003627350.2; XM_003627302.2.
DR AlphaFoldDB; G7L8A5; -.
DR STRING; 3880.G7L8A5; -.
DR PaxDb; 3880-AET01826; -.
DR EnsemblPlants; AET01826; AET01826; MTR_8g022010.
DR GeneID; 11418924; -.
DR Gramene; AET01826; AET01826; MTR_8g022010.
DR KEGG; mtr:11418924; -.
DR eggNOG; KOG1964; Eukaryota.
DR HOGENOM; CLU_299853_0_0_1; -.
DR OrthoDB; 2718743at2759; -.
DR Proteomes; UP000002051; Chromosome 8.
DR Proteomes; UP000265566; Chromosome 8.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0031080; C:nuclear pore outer ring; IBA:GO_Central.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IBA:GO_Central.
DR GO; GO:0006406; P:mRNA export from nucleus; IBA:GO_Central.
DR GO; GO:0000973; P:post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IBA:GO_Central.
DR GO; GO:0006606; P:protein import into nucleus; IBA:GO_Central.
DR Gene3D; 1.10.3450.20; -; 1.
DR Gene3D; 1.20.190.50; -; 2.
DR InterPro; IPR007252; Nup84/Nup107.
DR PANTHER; PTHR13003:SF2; NUCLEAR PORE COMPLEX PROTEIN NUP107; 1.
DR PANTHER; PTHR13003; NUP107-RELATED; 1.
DR Pfam; PF04121; Nup84_Nup100; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|RuleBase:RU365072};
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nuclear pore complex {ECO:0000256|RuleBase:RU365072};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365072};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Translocation {ECO:0000256|ARBA:ARBA00023010,
KW ECO:0000256|RuleBase:RU365072};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|RuleBase:RU365072}.
SQ SEQUENCE 1081 AA; 122427 MW; 8A52358A936C3531 CRC64;
MEEEMAMDSP FFDPQDLTTR EKFRRYGKRH LNSGASVEQD YSASKLSESG LFYDGQNIHS
PTNAALILEN IKQEVESLDA DYLDDKSLYS SRKRSSADVP GIPGMDDGFD SVRYSLKACK
QEGDSLGDDA DNIFNSFASL FDTSLTGMMP IPDLILRFEN ECRNVSESIR YGLNIRHRVV
EDKLMRQKAQ LLLDEAATWS LLWFLYGEET EELSKEKILV KQTSHLMACE FVTEDHIAQL
CLRIVQWLEG LASKALDLEA KVRGSHVGSY LPSSGVWHHT QRYLNKGTSD RNVVHHLDFD
APTRENANIL PDDKKQDESL LEDVWTLLRA GRLEEACGLC RSAGQPWRAS SLCPFGGLNL
FPSVEALAKN GKNRTLQAVE FESGIGHQWH LWKWASYCAS EKISELGGKY EAAVYAAQCS
NLRQMLPLCT DWESACWAMA KSWLDVQIDL EVTRSLPGGG VNQLGTFGDV MDRSPGQVDG
SFDPSNGPEN WPIQVLNQQP RQLSSLLQKL HSGEMIHETV TRQCKEQQRQ IQMTLMLADI
PRVLDLIWSW IAPVEDDQNV FRPHGDPQMI RFGAHLVLVL RYLPEAREEM KGALMDKILT
VGDHILHLYA KFLFSKEHEE LVGIYASQLA RHRCIDLFVY MMEFRLHSSV HVKYKIFLSA
MEYLPFSLMD ESKGCFEDII ERVLLRSREI KIGKYDNLSD VAEQHRQQSL EKAKVIQWLC
FTPPSTIANV KDVSKKLLLR ALIHSNVLFR EFALISMWRV PAMPIGAHTA LGFLAEPLKQ
LAETLEISDD HNVFEDLREF EEWREYYSCD ATYRNWLKIE SENAEVPVSE LSLEEKERAI
SAAKETLTAS LSLLERRETH WLASIDNIYE SAESVFLELH ATAMLCLPSG DCLCPDATVC
TTLTSALYSS AGDEVVSNRQ LVVNATISSR DHYCIDVVLR CLAIVGDGLR PHDFNDGGIL
STIIAAGFKG ELPRFQAGVA MEISRLDAWY SDQDGNLEFP ATYIVKGLCR RCCLPEVVLR
CMQVSVSLMG SGDQPDSHDN LIELVGSPET RFLDLFSQQQ LQEFLLMERE YSICKLEHTQ
E
//
