GenomeNet

Database: UniProt
Entry: G7LIT0_MEDTR
LinkDB: G7LIT0_MEDTR
Original site: G7LIT0_MEDTR 
ID   G7LIT0_MEDTR            Unreviewed;       926 AA.
AC   G7LIT0;
DT   25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT   25-JAN-2012, sequence version 1.
DT   24-JAN-2024, entry version 81.
DE   SubName: Full=ATP-dependent Clp protease ATP-binding subunit {ECO:0000313|EMBL:AET05058.1};
DE   SubName: Full=Putative ClpA/B family, UVR domain, P-loop containing nucleoside triphosphate hydrolase {ECO:0000313|EMBL:RHN43254.1};
GN   Name=11438455 {ECO:0000313|EnsemblPlants:AET05058};
GN   OrderedLocusNames=MTR_8g100040 {ECO:0000313|EMBL:AET05058.1};
GN   ORFNames=MtrunA17_Chr8g0385811 {ECO:0000313|EMBL:RHN43254.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:AET05058.1, ECO:0000313|Proteomes:UP000002051};
RN   [1] {ECO:0000313|EMBL:AET05058.1, ECO:0000313|Proteomes:UP000002051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:AET05058.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:AET05058,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA   Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA   Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA   Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA   Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA   Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA   Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA   Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA   Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA   Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA   Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA   Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA   Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA   Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA   Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA   Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA   Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA   Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA   Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [2] {ECO:0000313|EMBL:AET05058.1, ECO:0000313|Proteomes:UP000002051}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AET05058,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume Medicago
RT   truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [3] {ECO:0000313|EnsemblPlants:AET05058}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AET05058};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
RN   [4] {ECO:0000313|EMBL:RHN43254.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaves {ECO:0000313|EMBL:RHN43254.1};
RA   Pecrix Y., Gamas P., Carrere S.;
RT   "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL   Nat. Plants 0:0-0(2018).
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|RuleBase:RU004432}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM001224; AET05058.1; -; Genomic_DNA.
DR   EMBL; PSQE01000008; RHN43254.1; -; Genomic_DNA.
DR   RefSeq; XP_003630582.1; XM_003630534.2.
DR   AlphaFoldDB; G7LIT0; -.
DR   STRING; 3880.G7LIT0; -.
DR   PaxDb; 3880-AET05058; -.
DR   ProMEX; G7LIT0; -.
DR   EnsemblPlants; AET05058; AET05058; MTR_8g100040.
DR   GeneID; 11438455; -.
DR   Gramene; AET05058; AET05058; MTR_8g100040.
DR   KEGG; mtr:11438455; -.
DR   eggNOG; KOG1051; Eukaryota.
DR   HOGENOM; CLU_005070_4_1_1; -.
DR   OMA; ERMKAVM; -.
DR   OrthoDB; 275944at2759; -.
DR   Proteomes; UP000002051; Chromosome 8.
DR   Proteomes; UP000265566; Chromosome 8.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR   GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR   GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 2.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   Gene3D; 4.10.860.10; UVR domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001943; UVR_dom.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
DR   PROSITE; PS50151; UVR; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Hydrolase {ECO:0000313|EMBL:RHN43254.1};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432}; Protease {ECO:0000313|EMBL:AET05058.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          96..238
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   DOMAIN          513..548
FT                   /note="UVR"
FT                   /evidence="ECO:0000259|PROSITE:PS50151"
FT   COILED          509..565
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   926 AA;  102782 MW;  7F8EAA126CDA8862 CRC64;
     MSRALAQSIN VPGLVAGRRH VNNNKGAARS RRSVRMMFTT RTASPRLSSY SGLRTLNSLD
     SMLRPGQDFH SKVLTQIGTN RAKGGRGSRC VTKAMFERFT EKAIKVIMLA QEEARRLGHN
     FVGTEQILLG LIGEGTGIAA KVLKSMGINL KDARVEVEKI IGRGSGFVAV EIPFTPRAKR
     VLELSLEEAR QLGHNYIGSE HLLLGLLREG EGVAARVLEN LGADPTNIRT QVIRMVGEGA
     DSVGATVGSG SSNNKMPTLE EYGTNLTKLA EEGKLDPVVG RQPQIERVTQ ILGRRTKNNP
     CLIGEPGVGK TAIAEGLAQR IANGDVPETI EGKKVITLDM GLLVAGTKYR GEFEERLKKL
     MEEIKQSDEI ILFIDEVHTL IGAGAAEGAI DAANILKPAL ARGELQCIGA TTLDEYRKHI
     EKDPALERRF QPVKVPEPTV PETIQILKGL RERYEIHHKL RYTDEALVAA AELSHQYISD
     RFLPDKAIDL IDEAGSRVRL QHAQLPEEAR GLEKEVRQIV KEKDEAVRNQ EFEKAGELRD
     KEMDLKTQIS ALIEKNKEMN KAESEAGDVG ALVTEVDIQH IVASWTGIPV DKVSVDESDR
     LLKMEDTLHK RIIGQHEAVE AISRAIRRAR VGLKNPNRPI ASFIFSGPTG VGKSELAKAL
     ASYYFGSEEA MIRLDMSEFM ERHTVSKLIG SPPGYVGYTE GGQLTEAVRR RPYTVVLFDE
     IEKAHPDVFN MMLQILEDGR LTDSKGRTVD FKNTLLIMTS NVGSSVIEKG GRRIGFDLDY
     DEKDSSYNRI KSLVTEELKQ YFRPEFLNRL DEMIVFRQLT KLEVKEIADI MLKEVFERLK
     TKEIELSVTE RFRERVVDEG YNPSYGARPL RRAIMRLLED SMAEKMLARE IKEGDSVIVD
     ADSDGNVIVL NGSTGAPDSL PDALPV
//
DBGET integrated database retrieval system