ID G7LIT0_MEDTR Unreviewed; 926 AA.
AC G7LIT0;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 24-JAN-2024, entry version 81.
DE SubName: Full=ATP-dependent Clp protease ATP-binding subunit {ECO:0000313|EMBL:AET05058.1};
DE SubName: Full=Putative ClpA/B family, UVR domain, P-loop containing nucleoside triphosphate hydrolase {ECO:0000313|EMBL:RHN43254.1};
GN Name=11438455 {ECO:0000313|EnsemblPlants:AET05058};
GN OrderedLocusNames=MTR_8g100040 {ECO:0000313|EMBL:AET05058.1};
GN ORFNames=MtrunA17_Chr8g0385811 {ECO:0000313|EMBL:RHN43254.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AET05058.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AET05058.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AET05058.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AET05058,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AET05058.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AET05058,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AET05058}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AET05058};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|EMBL:RHN43254.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN43254.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CM001224; AET05058.1; -; Genomic_DNA.
DR EMBL; PSQE01000008; RHN43254.1; -; Genomic_DNA.
DR RefSeq; XP_003630582.1; XM_003630534.2.
DR AlphaFoldDB; G7LIT0; -.
DR STRING; 3880.G7LIT0; -.
DR PaxDb; 3880-AET05058; -.
DR ProMEX; G7LIT0; -.
DR EnsemblPlants; AET05058; AET05058; MTR_8g100040.
DR GeneID; 11438455; -.
DR Gramene; AET05058; AET05058; MTR_8g100040.
DR KEGG; mtr:11438455; -.
DR eggNOG; KOG1051; Eukaryota.
DR HOGENOM; CLU_005070_4_1_1; -.
DR OMA; ERMKAVM; -.
DR OrthoDB; 275944at2759; -.
DR Proteomes; UP000002051; Chromosome 8.
DR Proteomes; UP000265566; Chromosome 8.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS50151; UVR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Hydrolase {ECO:0000313|EMBL:RHN43254.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432}; Protease {ECO:0000313|EMBL:AET05058.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 96..238
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 513..548
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
FT COILED 509..565
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 926 AA; 102782 MW; 7F8EAA126CDA8862 CRC64;
MSRALAQSIN VPGLVAGRRH VNNNKGAARS RRSVRMMFTT RTASPRLSSY SGLRTLNSLD
SMLRPGQDFH SKVLTQIGTN RAKGGRGSRC VTKAMFERFT EKAIKVIMLA QEEARRLGHN
FVGTEQILLG LIGEGTGIAA KVLKSMGINL KDARVEVEKI IGRGSGFVAV EIPFTPRAKR
VLELSLEEAR QLGHNYIGSE HLLLGLLREG EGVAARVLEN LGADPTNIRT QVIRMVGEGA
DSVGATVGSG SSNNKMPTLE EYGTNLTKLA EEGKLDPVVG RQPQIERVTQ ILGRRTKNNP
CLIGEPGVGK TAIAEGLAQR IANGDVPETI EGKKVITLDM GLLVAGTKYR GEFEERLKKL
MEEIKQSDEI ILFIDEVHTL IGAGAAEGAI DAANILKPAL ARGELQCIGA TTLDEYRKHI
EKDPALERRF QPVKVPEPTV PETIQILKGL RERYEIHHKL RYTDEALVAA AELSHQYISD
RFLPDKAIDL IDEAGSRVRL QHAQLPEEAR GLEKEVRQIV KEKDEAVRNQ EFEKAGELRD
KEMDLKTQIS ALIEKNKEMN KAESEAGDVG ALVTEVDIQH IVASWTGIPV DKVSVDESDR
LLKMEDTLHK RIIGQHEAVE AISRAIRRAR VGLKNPNRPI ASFIFSGPTG VGKSELAKAL
ASYYFGSEEA MIRLDMSEFM ERHTVSKLIG SPPGYVGYTE GGQLTEAVRR RPYTVVLFDE
IEKAHPDVFN MMLQILEDGR LTDSKGRTVD FKNTLLIMTS NVGSSVIEKG GRRIGFDLDY
DEKDSSYNRI KSLVTEELKQ YFRPEFLNRL DEMIVFRQLT KLEVKEIADI MLKEVFERLK
TKEIELSVTE RFRERVVDEG YNPSYGARPL RRAIMRLLED SMAEKMLARE IKEGDSVIVD
ADSDGNVIVL NGSTGAPDSL PDALPV
//