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Database: UniProt
Entry: G7M1G5_9CLOT
LinkDB: G7M1G5_9CLOT
Original site: G7M1G5_9CLOT 
ID   G7M1G5_9CLOT            Unreviewed;       251 AA.
AC   G7M1G5;
DT   25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT   25-JAN-2012, sequence version 1.
DT   24-JAN-2024, entry version 53.
DE   RecName: Full=RNA polymerase sigma factor {ECO:0000256|RuleBase:RU362124};
GN   ORFNames=CDLVIII_1275 {ECO:0000313|EMBL:EHI97975.1};
OS   Clostridium sp. DL-VIII.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=641107 {ECO:0000313|EMBL:EHI97975.1, ECO:0000313|Proteomes:UP000005106};
RN   [1] {ECO:0000313|EMBL:EHI97975.1, ECO:0000313|Proteomes:UP000005106}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DL-VIII {ECO:0000313|EMBL:EHI97975.1,
RC   ECO:0000313|Proteomes:UP000005106};
RX   PubMed=23929491;
RA   Taghavi S., Izquierdo J.A., van der Lelie D.;
RT   "Complete Genome Sequence of Clostridium sp. Strain DL-VIII, a Novel
RT   Solventogenic Clostridium Species Isolated from Anaerobic Sludge.";
RL   Genome Announc. 1:e00605-e00613(2013).
CC   -!- FUNCTION: Sigma factors are initiation factors that promote the
CC       attachment of RNA polymerase to specific initiation sites and are then
CC       released. {ECO:0000256|RuleBase:RU362124}.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|ARBA:ARBA00007788, ECO:0000256|RuleBase:RU362124}.
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DR   EMBL; CM001240; EHI97975.1; -; Genomic_DNA.
DR   RefSeq; WP_009168657.1; NZ_CM001240.1.
DR   AlphaFoldDB; G7M1G5; -.
DR   STRING; 641107.CDLVIII_1275; -.
DR   eggNOG; COG1191; Bacteria.
DR   HOGENOM; CLU_014793_8_5_9; -.
DR   Proteomes; UP000005106; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   GO; GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.20.120.1810; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR   InterPro; IPR014236; RNA_pol_sigma-F.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02980; SigBFG; 1.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   NCBIfam; TIGR02885; spore_sigF; 1.
DR   PANTHER; PTHR30385:SF4; RNA POLYMERASE SIGMA FACTOR SIGO; 1.
DR   PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR   PROSITE; PS50943; HTH_CROC1; 1.
DR   PROSITE; PS00715; SIGMA70_1; 1.
DR   PROSITE; PS00716; SIGMA70_2; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU362124};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005106};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082,
KW   ECO:0000256|RuleBase:RU362124};
KW   Sporulation {ECO:0000256|ARBA:ARBA00022969};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163,
KW   ECO:0000256|RuleBase:RU362124};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW   ECO:0000256|RuleBase:RU362124}.
FT   DOMAIN          209..239
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   251 AA;  28966 MW;  FE4849B0135CFD49 CRC64;
     MDKEDLSRED YNYNKNPELL ILARNGDADA MNKLIEMNLP LVSSISKKFL NRGYDYEDIF
     QIGSIGLVKA INNFDLTYNV KFSTYAVPMI IGEIKRFLRD DGMIKVSRNV KSLARKVHFY
     KEILTKKLKR SPTIEELAEY ANVDKEEILF AIESSNSLQY LYDTIHQDDG APVLLIDKLS
     EKSIDDGNLI ERIALKEALR SLDSKARQII MLRYFKDKTQ VQVAKMLGIS QVQVSRIEKK
     VLSEMKKKLE E
//
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