ID G7V9X2_THELD Unreviewed; 452 AA.
AC G7V9X2;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Integrase catalytic region {ECO:0000313|EMBL:AER66672.1};
GN OrderedLocusNames=Tlie_0939 {ECO:0000313|EMBL:AER66672.1};
OS Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).
OC Bacteria; Synergistota; Synergistia; Synergistales; Thermovirgaceae;
OC Thermovirga.
OX NCBI_TaxID=580340 {ECO:0000313|EMBL:AER66672.1, ECO:0000313|Proteomes:UP000005868};
RN [1] {ECO:0000313|Proteomes:UP000005868}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1197 / DSM 17291 / Cas60314
RC {ECO:0000313|Proteomes:UP000005868};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Saunders E.,
RA Kyrpides N., Mavromatis K., Ivanova N., Last F.I., Brettin T., Detter J.C.,
RA Han C., Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E.-M.,
RA Klenk H.-P., Eisen J.A.;
RT "The complete genome of chromosome of Thermovirga lienii DSM 17291.";
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AER66672.1, ECO:0000313|Proteomes:UP000005868}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1197 / DSM 17291 / Cas60314
RC {ECO:0000313|Proteomes:UP000005868};
RX PubMed=22768366; DOI=10.4056/sigs.2726028;
RA Goker M., Saunders E., Lapidus A., Nolan M., Lucas S., Hammon N.,
RA Deshpande S., Cheng J.F., Han C., Tapia R., Goodwin L.A., Pitluck S.,
RA Liolios K., Mavromatis K., Pagani I., Ivanova N., Mikhailova N., Pati A.,
RA Chen A., Palaniappan K., Land M., Chang Y.J., Jeffries C.D.,
RA Brambilla E.M., Rohde M., Spring S., Detter J.C., Woyke T., Bristow J.,
RA Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT "Genome sequence of the moderately thermophilic, amino-acid-degrading and
RT sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314(T)).";
RL Stand. Genomic Sci. 6:230-239(2012).
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DR EMBL; CP003096; AER66672.1; -; Genomic_DNA.
DR AlphaFoldDB; G7V9X2; -.
DR STRING; 580340.Tlie_0939; -.
DR KEGG; tli:Tlie_0939; -.
DR eggNOG; COG2801; Bacteria.
DR HOGENOM; CLU_041517_0_1_0; -.
DR OrthoDB; 4864at2; -.
DR Proteomes; UP000005868; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR047797; ISNCY_transpos.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033594; transpos_ISNCY_2; 1.
DR PANTHER; PTHR35004:SF7; INTEGRASE PROTEIN-RELATED; 1.
DR PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR Pfam; PF13518; HTH_28; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000005868}.
FT DOMAIN 138..326
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 400..452
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..443
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 452 AA; 51056 MW; 757E108789D910E4 CRC64;
MSRGDVYLSE KESRRVYVME RLMDGVVTVK EASCVLGLSE RQIKRLKAGV KERGIAALAH
GNRGRKPKHA TSKEVKEAIV GFAVGKYHGA SYQHMSELMK EHDGIFVSAK TVGRILKEAS
IPNKHTHKTP RRRRTRNRMS MEGMLVQCDA SPHDWLEGRC SKLCLHGAID DATGKIFGLY
FRPNEDLLGY LHVLKQMVED YGVPRSIYSD GHSIFFSPKG DKLSIEEELK GERVKLTQFG
EVLNQLGITH IKARSPQAKG RIERLWETLQ SRLIVELRIA NICTMEDAND FLCDFKKRFN
SRFAVRAEDK EQAFRANPGL ESLHKIICIR SHRKASNGST ISYGGSTYQL LDSKGHVVPL
KPKSPVCVTR HLDGSLGALY SGDYFKLKAI SSDSNKKAIQ EENLENKAKP RGKYKPSMDH
PWRRSINSTT KDHKNKKRYP LEGELGGIHA PY
//
