ID G7ZZ81_MEDTR Unreviewed; 1023 AA.
AC G7ZZ81;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=Pentatricopeptide (PPR) repeat protein {ECO:0000313|EMBL:KEH31099.1};
GN OrderedLocusNames=MTR_4g089005 {ECO:0000313|EMBL:KEH31099.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH31099.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH31099.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH31099.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH31099,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH31099.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH31099.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH31099,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH31099}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH31099};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM001220; KEH31099.1; -; Genomic_DNA.
DR RefSeq; XP_013457068.1; XM_013601614.1.
DR AlphaFoldDB; G7ZZ81; -.
DR PaxDb; 3880-AES84519; -.
DR EnsemblPlants; KEH31099; KEH31099; MTR_4g089005.
DR Gramene; KEH31099; KEH31099; MTR_4g089005.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_19_1; -.
DR OMA; CEHGLAD; -.
DR Proteomes; UP000002051; Chromosome 4.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 10.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 16.
DR PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR PANTHER; PTHR47938:SF10; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 7.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 20.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 161..195
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 196..230
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 231..265
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 266..296
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 320..354
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 355..389
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 390..424
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 425..459
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 460..494
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 495..529
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 530..564
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 565..599
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 600..634
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 669..703
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 704..738
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 774..808
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 809..843
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 844..882
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 883..917
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 918..952
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 1023 AA; 115605 MW; B018843682341F86 CRC64;
MMMMHLKKIR VQTNTLIFFF SPPTRLRRFF YPTPITRTFS SQIHKDSIFI PPTKTHLYVS
FFCTLIRLYL THDRFSTASA TFSHMRALGL VPTLPFWNTL LYQFNASGLV SQVKLMYSDM
LFCGVVPDVF SVNVLVHSLC KVGDLDLALG YLRNNDVVDI DNVTYNTVIW GFCQKGLVDQ
GFGLLSEMVK RGLCFDSITC NILVKGYCRI GLVQYAEWVM YNLVDGGVTK DVIGLNTLID
GYCEAGLMSQ ATELIENSWR SDVKIDIVTY NTLLKAFCKT GDLTRAESLF NEILGFWKDE
DRLKNNDVVT QNEIKNLQPT LVTYTTLIAA YCKFVGVEES HSLYKKMIMN GIMPDVVTCS
SILYGFCRHG KLTEAAVLFR EMYEMGLDPN HVSYATIINS LFKSGRVMEA FNLQSQMVVR
GISFDIVTCT TVMDGLFKVG KTKEAEEVFE TILKLNLAPN CVTYSALLDG YCKLGKMELA
ELVLQKMEKE HVPPNVITFS SIINGYAKKG MLSKAVDVLR EMVQRNVMPN TIVYAILIDG
YFKAGEQDVA DDFCKEMKSR RLEESNVIFD ILLNNLKRVG RMDEARSLII DMYSKGIDPD
IVNYASLIDG YFKEGNQLAA LSIVQEMKEK NIRFDVVAYN ALIKGLLRLG KYDPRYVCSR
MIELGLAPDC ITYNTIINTY CIKGKTEDAL DILNEMKSYG IMPNAVTYNI LIGGLCKTGA
VEKAESALDE MLVMEFVPTP ITHKFLVKAY SRSEKADKIL QIHEKLVASG LELSLTVYNT
LITVFCRLGM TRKAKVVLDE MVKRGISADL VTYNALIRGY CTGSHVEKAL KTYSQMFVDG
IAPNITTYNT LLGGLSNAGL MEEMMEETEK LVSEMNERGL VPNAATYDIL VSGYGRVGNR
KKTIILHIEM ITKGFVPTLK TYNVLISDYA KSGKMIEARE LLNDLLTKGR IPNSFTYDIL
TCGWLNLSYE PEIDRSLKRS YEIEVKKLLI EMGRKGLKFS KKAEIRRLKI FPHWMVDALN
KCL
//
