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Database: UniProt
Entry: GTDC1_DANRE
LinkDB: GTDC1_DANRE
Original site: GTDC1_DANRE 
ID   GTDC1_DANRE             Reviewed;         433 AA.
AC   Q568B7; B0S8J7;
DT   13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-JUL-2008, sequence version 2.
DT   20-JUN-2018, entry version 78.
DE   RecName: Full=Glycosyltransferase-like domain-containing protein 1;
GN   Name=gtdc1; ORFNames=si:dkey-52o2.3, zgc:110568;
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen;
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G.,
RA   Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B.,
RA   Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S.,
RA   Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C.,
RA   Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H.,
RA   Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C.,
RA   Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA   McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA   Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA   Humphries M., Sycamore N., Barker D., Saunders D., Wallis J.,
RA   Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S.,
RA   Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R.,
RA   Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R.,
RA   Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R.,
RA   Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A.,
RA   Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M.,
RA   Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M.,
RA   Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S.,
RA   Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Embryo;
RG   NIH - Zebrafish Gene Collection (ZGC) project;
RL   Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the glycosyltransferase group 1 family.
CC       Glycosyltransferase 4 subfamily. {ECO:0000305}.
DR   EMBL; BX936460; CAQ15307.1; -; Genomic_DNA.
DR   EMBL; CR925716; CAQ15307.1; JOINED; Genomic_DNA.
DR   EMBL; CR925716; CAQ14815.1; -; Genomic_DNA.
DR   EMBL; BX936460; CAQ14815.1; JOINED; Genomic_DNA.
DR   EMBL; BC092932; AAH92932.1; -; mRNA.
DR   RefSeq; NP_001017560.1; NM_001017560.1.
DR   UniGene; Dr.162112; -.
DR   ProteinModelPortal; Q568B7; -.
DR   STRING; 7955.ENSDARP00000016818; -.
DR   CAZy; GT4; Glycosyltransferase Family 4.
DR   PaxDb; Q568B7; -.
DR   Ensembl; ENSDART00000024572; ENSDARP00000016818; ENSDARG00000020642.
DR   Ensembl; ENSDART00000127135; ENSDARP00000109130; ENSDARG00000020642.
DR   GeneID; 550132; -.
DR   KEGG; dre:550132; -.
DR   CTD; 79712; -.
DR   ZFIN; ZDB-GENE-050417-8; gtdc1.
DR   eggNOG; ENOG410IICG; Eukaryota.
DR   eggNOG; ENOG410ZWWX; LUCA.
DR   GeneTree; ENSGT00390000006631; -.
DR   HOGENOM; HOG000226048; -.
DR   HOVERGEN; HBG106976; -.
DR   InParanoid; Q568B7; -.
DR   OMA; PDVSRFM; -.
DR   OrthoDB; EOG091G08MX; -.
DR   PhylomeDB; Q568B7; -.
DR   TreeFam; TF324818; -.
DR   PRO; PR:Q568B7; -.
DR   Proteomes; UP000000437; Chromosome 9.
DR   Bgee; ENSDARG00000020642; -.
DR   ExpressionAtlas; Q568B7; baseline.
DR   GO; GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
DR   GO; GO:0007417; P:central nervous system development; IMP:ZFIN.
DR   InterPro; IPR001296; Glyco_trans_1.
DR   InterPro; IPR022701; GlycosylTrfase_1_N.
DR   Pfam; PF12038; DUF3524; 1.
DR   Pfam; PF00534; Glycos_transf_1; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome; Glycosyltransferase; Reference proteome;
KW   Transferase.
FT   CHAIN         1    433       Glycosyltransferase-like domain-
FT                                containing protein 1.
FT                                /FTId=PRO_0000311092.
FT   CONFLICT     54     54       P -> L (in Ref. 2; AAH92932).
FT                                {ECO:0000305}.
FT   CONFLICT    432    432       M -> L (in Ref. 2; AAH92932).
FT                                {ECO:0000305}.
SQ   SEQUENCE   433 AA;  49737 MW;  237CE823458A5849 CRC64;
     MSVLLLEAFY GGSHKQLLDL LKESVEDCVS FTLPAKKWHW RARTSALYFM QAVPANSSYR
     VLFTSSVLNL AELVALRPDL GHLKKVLYFH ENQLVYPVRK SQERDFQYGY NQILSCLVAD
     VVVFNSSFNM ESFLSSISTF MKTMPDHRPK DLERLIRPKC HVLHFPIRFP DVTRFLPAHK
     RLRHPVRCDD IHAPAAKSHI QTSSPSSYPD VEPPEKMLNV AGTNQSHEPT SVTPHQETAS
     PLCGHEGEKL RPLHIVWPHR WEHDKDPQLF FQTLLKLKDR QLSFEVSVLG ETFTDVPDIF
     SEAKEQLVDH IQHWGFMPSK EDYLKVLCQA DVVVSTAKHE FFGVAMLEAV HCGCYPLCPK
     ALVYPEIFPA TYLYSTPEQL CKRLQEFCKR PQLARQHVVQ VSLSSFSWDS LGDNFRSLLK
     ADSGRMFTDK HMA
//
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