ID H0ZBQ7_TAEGU Unreviewed; 729 AA.
AC H0ZBQ7;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 2.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=Scm polycomb group protein like 2 {ECO:0000313|Ensembl:ENSTGUP00000008015.2};
GN Name=SCML2 {ECO:0000313|Ensembl:ENSTGUP00000008015.2};
OS Taeniopygia guttata (Zebra finch) (Poephila guttata).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae;
OC Estrildinae; Taeniopygia.
OX NCBI_TaxID=59729 {ECO:0000313|Ensembl:ENSTGUP00000008015.2, ECO:0000313|Proteomes:UP000007754};
RN [1] {ECO:0000313|Ensembl:ENSTGUP00000008015.2, ECO:0000313|Proteomes:UP000007754}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=20360741; DOI=10.1038/nature08819;
RA Warren W.C., Clayton D.F., Ellegren H., Arnold A.P., Hillier L.W.,
RA Kunstner A., Searle S., White S., Vilella A.J., Fairley S., Heger A.,
RA Kong L., Ponting C.P., Jarvis E.D., Mello C.V., Minx P., Lovell P.,
RA Velho T.A., Ferris M., Balakrishnan C.N., Sinha S., Blatti C., London S.E.,
RA Li Y., Lin Y.C., George J., Sweedler J., Southey B., Gunaratne P.,
RA Watson M., Nam K., Backstrom N., Smeds L., Nabholz B., Itoh Y., Whitney O.,
RA Pfenning A.R., Howard J., Volker M., Skinner B.M., Griffin D.K., Ye L.,
RA McLaren W.M., Flicek P., Quesada V., Velasco G., Lopez-Otin C.,
RA Puente X.S., Olender T., Lancet D., Smit A.F., Hubley R., Konkel M.K.,
RA Walker J.A., Batzer M.A., Gu W., Pollock D.D., Chen L., Cheng Z.,
RA Eichler E.E., Stapley J., Slate J., Ekblom R., Birkhead T., Burke T.,
RA Burt D., Scharff C., Adam I., Richard H., Sultan M., Soldatov A.,
RA Lehrach H., Edwards S.V., Yang S.P., Li X., Graves T., Fulton L.,
RA Nelson J., Chinwalla A., Hou S., Mardis E.R., Wilson R.K.;
RT "The genome of a songbird.";
RL Nature 464:757-762(2010).
RN [2] {ECO:0000313|Ensembl:ENSTGUP00000008015.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SCM family. {ECO:0000256|ARBA:ARBA00008469}.
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DR AlphaFoldDB; H0ZBQ7; -.
DR STRING; 59729.ENSTGUP00000008015; -.
DR Ensembl; ENSTGUT00000008100.2; ENSTGUP00000008015.2; ENSTGUG00000007781.2.
DR GeneTree; ENSGT00940000159407; -.
DR HOGENOM; CLU_015000_1_1_1; -.
DR InParanoid; H0ZBQ7; -.
DR OMA; TEEPICC; -.
DR TreeFam; TF106488; -.
DR Proteomes; UP000007754; Chromosome 1.
DR GO; GO:0000785; C:chromatin; IEA:Ensembl.
DR GO; GO:0031519; C:PcG protein complex; IEA:Ensembl.
DR GO; GO:0009653; P:anatomical structure morphogenesis; IEA:Ensembl.
DR GO; GO:0006915; P:apoptotic process; IEA:Ensembl.
DR GO; GO:0034502; P:protein localization to chromosome; IEA:Ensembl.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd20109; MBT_SCML2_rpt2; 1.
DR CDD; cd09578; SAM_Scm; 1.
DR Gene3D; 2.30.30.140; -; 2.
DR Gene3D; 3.90.1150.190; SLED domain; 1.
DR Gene3D; 1.10.150.50; Transcription Factor, Ets-1; 1.
DR InterPro; IPR004092; Mbt.
DR InterPro; IPR001660; SAM.
DR InterPro; IPR013761; SAM/pointed_sf.
DR InterPro; IPR047531; SAM_Scm-like.
DR InterPro; IPR033763; SCML2_RBR.
DR InterPro; IPR021987; SLED.
DR InterPro; IPR038348; SLED_sf.
DR PANTHER; PTHR12247; POLYCOMB GROUP PROTEIN; 1.
DR PANTHER; PTHR12247:SF84; SEX COMB ON MIDLEG-LIKE PROTEIN 2; 1.
DR Pfam; PF02820; MBT; 2.
DR Pfam; PF17208; RBR; 1.
DR Pfam; PF00536; SAM_1; 1.
DR Pfam; PF12140; SLED; 1.
DR SMART; SM00561; MBT; 2.
DR SMART; SM00454; SAM; 1.
DR SUPFAM; SSF47769; SAM/Pointed domain; 1.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 2.
DR PROSITE; PS51079; MBT; 2.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000007754};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Repressor {ECO:0000256|ARBA:ARBA00022491}.
FT REPEAT 33..131
FT /note="MBT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT REPEAT 139..240
FT /note="MBT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT DOMAIN 658..727
FT /note="SAM"
FT /evidence="ECO:0000259|SMART:SM00454"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 241..352
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 503..579
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 241..273
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 334..352
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 534..560
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 561..579
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 729 AA; 80408 MW; 36C1EA3691D5F170 CRC64;
MGRTSAKDSK NIKKEKDGKN QQANNPSLKS EQFNWDDYLK ETESVAAPLH CFRQSRIPPK
NDFKVGMKLE AHDPRNVTSV CIATIIGITG ARLRLRLDGS DNKNDFWRLV DSSDIQPIGT
CEKKGGMLQP PLGFQMNASS WPMFLLRTLN GAEIAPAAFF KKEPPKPVPN CFKVGMKLEA
IDRKNPYLIC PATIGDVKGD EVFVTFDGWR GAFDYWCRCD SRDIFPVGWC SLTGDALQPP
GNNVSITKSS AKIQSSPSKV TRRSMQSPQK SAPVPAQRGR KPGRGKPPGQ SAVPKKGRSP
KNIPLTKSTS HTENLKTRKK SLKPGKKKKI LPEQLTPTSL SPQSSPEGEN GTAQILKDGI
TLSGATAAVI STVCVYVNKH GNSGPHLDKK KVQHLPDHFG PGPVNVVLQQ AVQACVECAY
QAKTVFGFLK SGHHGGEVIT ASFDGEKHTI NLPSVNSASF VLRFLEKLCH SLQCDNLFSS
QPFSPYMGCA HSPMEYDRNK PAKEEIPENR SAKRYPQDSP PYTAPLSPKL PRNDAHPSEA
ETLPIEENST SKDHRFSEDS MDSALNSVNL SNPTCRNSTE YRTSGNAAYY RNSHQPATAT
SNSAPVLRRL SLSSAGSSGY YEVSRNRIQR RIEAASSTTG PDLNSLKREP SRIVNKDPST
WSIEEVVHFV KEADPRALAP HAELFRRHEI DGKALLLLRS DMIMKYMGLK LGPALKLCYH
IERLKQGKF
//