ID H0ZBW6_TAEGU Unreviewed; 751 AA.
AC H0ZBW6;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 2.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=Pre-mRNA 3'-end-processing factor FIP1 {ECO:0000256|ARBA:ARBA00017456};
DE AltName: Full=FIP1-like 1 protein {ECO:0000256|ARBA:ARBA00031816};
OS Taeniopygia guttata (Zebra finch) (Poephila guttata).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae;
OC Estrildinae; Taeniopygia.
OX NCBI_TaxID=59729 {ECO:0000313|Ensembl:ENSTGUP00000008074.2, ECO:0000313|Proteomes:UP000007754};
RN [1] {ECO:0000313|Ensembl:ENSTGUP00000008074.2, ECO:0000313|Proteomes:UP000007754}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=20360741; DOI=10.1038/nature08819;
RA Warren W.C., Clayton D.F., Ellegren H., Arnold A.P., Hillier L.W.,
RA Kunstner A., Searle S., White S., Vilella A.J., Fairley S., Heger A.,
RA Kong L., Ponting C.P., Jarvis E.D., Mello C.V., Minx P., Lovell P.,
RA Velho T.A., Ferris M., Balakrishnan C.N., Sinha S., Blatti C., London S.E.,
RA Li Y., Lin Y.C., George J., Sweedler J., Southey B., Gunaratne P.,
RA Watson M., Nam K., Backstrom N., Smeds L., Nabholz B., Itoh Y., Whitney O.,
RA Pfenning A.R., Howard J., Volker M., Skinner B.M., Griffin D.K., Ye L.,
RA McLaren W.M., Flicek P., Quesada V., Velasco G., Lopez-Otin C.,
RA Puente X.S., Olender T., Lancet D., Smit A.F., Hubley R., Konkel M.K.,
RA Walker J.A., Batzer M.A., Gu W., Pollock D.D., Chen L., Cheng Z.,
RA Eichler E.E., Stapley J., Slate J., Ekblom R., Birkhead T., Burke T.,
RA Burt D., Scharff C., Adam I., Richard H., Sultan M., Soldatov A.,
RA Lehrach H., Edwards S.V., Yang S.P., Li X., Graves T., Fulton L.,
RA Nelson J., Chinwalla A., Hou S., Mardis E.R., Wilson R.K.;
RT "The genome of a songbird.";
RL Nature 464:757-762(2010).
RN [2] {ECO:0000313|Ensembl:ENSTGUP00000008074.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the FIP1 family.
CC {ECO:0000256|ARBA:ARBA00007459}.
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DR AlphaFoldDB; H0ZBW6; -.
DR STRING; 59729.ENSTGUP00000008074; -.
DR Ensembl; ENSTGUT00000008159.2; ENSTGUP00000008074.2; ENSTGUG00000007834.2.
DR GeneTree; ENSGT00940000162578; -.
DR HOGENOM; CLU_035577_1_0_1; -.
DR InParanoid; H0ZBW6; -.
DR OMA; YYPRRED; -.
DR TreeFam; TF318610; -.
DR Proteomes; UP000007754; Chromosome 4.
DR GO; GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IEA:Ensembl.
DR InterPro; IPR007854; Fip1_dom.
DR PANTHER; PTHR13484; FIP1-LIKE 1 PROTEIN; 1.
DR PANTHER; PTHR13484:SF9; PRE-MRNA 3'-END-PROCESSING FACTOR FIP1; 1.
DR Pfam; PF05182; Fip1; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000007754}.
FT DOMAIN 305..347
FT /note="Pre-mRNA polyadenylation factor Fip1"
FT /evidence="ECO:0000259|Pfam:PF05182"
FT REGION 1..247
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 472..751
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..38
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 75..89
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 184..199
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 472..527
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 547..574
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 604..718
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 751 AA; 82586 MW; C8A917507CEC4A52 CRC64;
MFSGDGHAAG DPCYGDGRAP RDAGEHKDHR EHTAARGREG GSRSAPRQSG DRPAAVSGRA
RTEPGGSAGR AVPGPGRPGR PPQPVPGAPQ GRAGPASCAC HSRGGRGSAG RQRRRILRER
PRWAFAAARP CSAWPRAEAP GSPGAARRGG RRREALPGPG PRVPREAAMS TGEAERLSAD
ADGAAGDEEE EWLYGDENEA ERPEEEKSSA PPPPGSEEEA AENGIVKTKV AEAEDDSDSD
SDDDEDDVQV TIGDIKTGAP QFSYGAAPVN LNIKAGGRAY GSSGAKVKGL DLDAPGSING
VPLLEVDLDS FEDKPWRKPG ADLSDYFNYG FNEDTWKAYC EKQKRIRMGL EILPVTSTTN
KITAEDKAME VRPSAEILDG RYHLLKVQQG RTGNLEKELA VQSTKPDFTS PPALFKSGIP
TNRRISGTID VIGQTITISR VEGRRRANEN SNIQVLSERS NPEVDSFTKP PPFFPPGAPP
THLPPPPFLP PPPTVSTAPP LIPPPGIPIT VPPPGFPPPP GGPPPSLIPT IDSGHSSGYD
GRPVRAFSYG SDDEVELKTN DSLKVRKASK ADKQKGRSPQ YFTFPHPAGS APSWSSLLDT
SKQWDYYARR EKDRERERER SRDRDRDRDR DRDRDRDRTR DRERDRDHSP SSSAFNSDEE
RYRYRDYAER GYDRHRTSRE KEDRHRDRRH REKEETRHKS SRSNSRRRHD SEEGDSHRRH
KHKKSKRSKE GKEASGEPAP EQENTEAAPV E
//
