ID H0ZG23_TAEGU Unreviewed; 324 AA.
AC H0ZG23;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 2.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=THUMP domain containing 1 {ECO:0000313|Ensembl:ENSTGUP00000009535.2};
GN Name=THUMPD1 {ECO:0000313|Ensembl:ENSTGUP00000009535.2};
OS Taeniopygia guttata (Zebra finch) (Poephila guttata).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae;
OC Estrildinae; Taeniopygia.
OX NCBI_TaxID=59729 {ECO:0000313|Ensembl:ENSTGUP00000009535.2, ECO:0000313|Proteomes:UP000007754};
RN [1] {ECO:0000313|Ensembl:ENSTGUP00000009535.2, ECO:0000313|Proteomes:UP000007754}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=20360741; DOI=10.1038/nature08819;
RA Warren W.C., Clayton D.F., Ellegren H., Arnold A.P., Hillier L.W.,
RA Kunstner A., Searle S., White S., Vilella A.J., Fairley S., Heger A.,
RA Kong L., Ponting C.P., Jarvis E.D., Mello C.V., Minx P., Lovell P.,
RA Velho T.A., Ferris M., Balakrishnan C.N., Sinha S., Blatti C., London S.E.,
RA Li Y., Lin Y.C., George J., Sweedler J., Southey B., Gunaratne P.,
RA Watson M., Nam K., Backstrom N., Smeds L., Nabholz B., Itoh Y., Whitney O.,
RA Pfenning A.R., Howard J., Volker M., Skinner B.M., Griffin D.K., Ye L.,
RA McLaren W.M., Flicek P., Quesada V., Velasco G., Lopez-Otin C.,
RA Puente X.S., Olender T., Lancet D., Smit A.F., Hubley R., Konkel M.K.,
RA Walker J.A., Batzer M.A., Gu W., Pollock D.D., Chen L., Cheng Z.,
RA Eichler E.E., Stapley J., Slate J., Ekblom R., Birkhead T., Burke T.,
RA Burt D., Scharff C., Adam I., Richard H., Sultan M., Soldatov A.,
RA Lehrach H., Edwards S.V., Yang S.P., Li X., Graves T., Fulton L.,
RA Nelson J., Chinwalla A., Hou S., Mardis E.R., Wilson R.K.;
RT "The genome of a songbird.";
RL Nature 464:757-762(2010).
RN [2] {ECO:0000313|Ensembl:ENSTGUP00000009535.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; H0ZG23; -.
DR STRING; 59729.ENSTGUP00000009535; -.
DR Ensembl; ENSTGUT00000009636.2; ENSTGUP00000009535.2; ENSTGUG00000009247.2.
DR GeneTree; ENSGT00390000002365; -.
DR HOGENOM; CLU_039352_0_0_1; -.
DR InParanoid; H0ZG23; -.
DR OMA; KDQKPPG; -.
DR OrthoDB; 550044at2759; -.
DR TreeFam; TF313884; -.
DR Proteomes; UP000007754; Chromosome 14.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006400; P:tRNA modification; IEA:InterPro.
DR CDD; cd11717; THUMP_THUMPD1_like; 1.
DR Gene3D; 3.30.2300.10; THUMP superfamily; 1.
DR InterPro; IPR004114; THUMP_dom.
DR InterPro; IPR040183; THUMPD1-like.
DR PANTHER; PTHR13452; THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; 1.
DR PANTHER; PTHR13452:SF10; THUMP DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF02926; THUMP; 1.
DR SMART; SM00981; THUMP; 1.
DR SUPFAM; SSF143437; THUMP domain-like; 1.
DR PROSITE; PS51165; THUMP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007754};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00529}.
FT DOMAIN 144..251
FT /note="THUMP"
FT /evidence="ECO:0000259|PROSITE:PS51165"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 267..324
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 267..285
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 286..311
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 324 AA; 36542 MW; 79040D0ECB5FC947 CRC64;
MAAAEPAARK RRPKGHFAAG PGRAKRPRGA GRQLEAGMRG ILITCNMNER KCVGEAYSLL
GEYGDLLYGP EQFSDHEERL SGSDREEDED DVEAALKKEV GQIRASTEQK LRRFQSVESG
ANNVVFIRTQ GIEPENLVHH ILKDMHTTKK KKTRVILRML PISGTCKAFM EDMKKYTETF
FEPWFKAPNK GTYQIVYKAR NNSHMSREEV IKELAGIVGS LNPENKVDLN NPQYTIVVEI
IKTVCCLSVV RDYVLFRKYN LQEVVKSNKE DAQQNPSSVT KEQNSEVVKA EAEEQEKSSK
EVKEENKNQS EIGSESKGTD ALSV
//
