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Database: UniProt
Entry: H0ZP56_TAEGU
LinkDB: H0ZP56_TAEGU
Original site: H0ZP56_TAEGU 
ID   H0ZP56_TAEGU            Unreviewed;      3091 AA.
AC   H0ZP56;
DT   22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT   22-FEB-2012, sequence version 1.
DT   05-JUN-2019, entry version 52.
DE   SubName: Full=REV3 like, DNA directed polymerase zeta catalytic subunit {ECO:0000313|Ensembl:ENSTGUP00000012386};
GN   Name=REV3L {ECO:0000313|Ensembl:ENSTGUP00000012386};
OS   Taeniopygia guttata (Zebra finch) (Poephila guttata).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea;
OC   Estrildidae; Estrildinae; Taeniopygia.
OX   NCBI_TaxID=59729 {ECO:0000313|Ensembl:ENSTGUP00000012386, ECO:0000313|Proteomes:UP000007754};
RN   [1] {ECO:0000313|Ensembl:ENSTGUP00000012386, ECO:0000313|Proteomes:UP000007754}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=20360741; DOI=10.1038/nature08819;
RA   Warren W.C., Clayton D.F., Ellegren H., Arnold A.P., Hillier L.W.,
RA   Kunstner A., Searle S., White S., Vilella A.J., Fairley S., Heger A.,
RA   Kong L., Ponting C.P., Jarvis E.D., Mello C.V., Minx P., Lovell P.,
RA   Velho T.A., Ferris M., Balakrishnan C.N., Sinha S., Blatti C.,
RA   London S.E., Li Y., Lin Y.C., George J., Sweedler J., Southey B.,
RA   Gunaratne P., Watson M., Nam K., Backstrom N., Smeds L., Nabholz B.,
RA   Itoh Y., Whitney O., Pfenning A.R., Howard J., Volker M.,
RA   Skinner B.M., Griffin D.K., Ye L., McLaren W.M., Flicek P.,
RA   Quesada V., Velasco G., Lopez-Otin C., Puente X.S., Olender T.,
RA   Lancet D., Smit A.F., Hubley R., Konkel M.K., Walker J.A.,
RA   Batzer M.A., Gu W., Pollock D.D., Chen L., Cheng Z., Eichler E.E.,
RA   Stapley J., Slate J., Ekblom R., Birkhead T., Burke T., Burt D.,
RA   Scharff C., Adam I., Richard H., Sultan M., Soldatov A., Lehrach H.,
RA   Edwards S.V., Yang S.P., Li X., Graves T., Fulton L., Nelson J.,
RA   Chinwalla A., Hou S., Mardis E.R., Wilson R.K.;
RT   "The genome of a songbird.";
RL   Nature 464:757-762(2010).
RN   [2] {ECO:0000313|Ensembl:ENSTGUP00000012386}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JAN-2012) to UniProtKB.
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DR   EMBL; ABQF01000390; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; ABQF01000391; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   Ensembl; ENSTGUT00000012524; ENSTGUP00000012386; ENSTGUG00000012020.
DR   eggNOG; KOG0968; Eukaryota.
DR   eggNOG; COG0417; LUCA.
DR   GeneTree; ENSGT00940000156226; -.
DR   InParanoid; H0ZP56; -.
DR   OMA; CSKCRSQ; -.
DR   TreeFam; TF101072; -.
DR   Proteomes; UP000007754; Chromosome 3.
DR   GO; GO:0005730; C:nucleolus; IEA:Ensembl.
DR   GO; GO:0016035; C:zeta DNA polymerase complex; IEA:Ensembl.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0019985; P:translesion synthesis; IEA:InterPro.
DR   Gene3D; 1.10.132.60; -; 1.
DR   Gene3D; 3.30.420.10; -; 1.
DR   Gene3D; 3.90.1600.10; -; 1.
DR   InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR   InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR   InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR   InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR   InterPro; IPR042087; DNA_pol_B_C.
DR   InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR   InterPro; IPR032757; DUF4683.
DR   InterPro; IPR030559; PolZ_Rev3.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR025687; Znf-C4pol.
DR   PANTHER; PTHR45812; PTHR45812; 2.
DR   Pfam; PF00136; DNA_pol_B; 1.
DR   Pfam; PF03104; DNA_pol_B_exo1; 2.
DR   Pfam; PF15735; DUF4683; 1.
DR   Pfam; PF14260; zf-C4pol; 1.
DR   PRINTS; PR00106; DNAPOLB.
DR   SMART; SM00486; POLBc; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000007754};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007754}.
FT   DOMAIN        2    145       DNA_pol_B_exo1. {ECO:0000259|Pfam:
FT                                PF03104}.
FT   DOMAIN      698   1087       DUF4683. {ECO:0000259|Pfam:PF15735}.
FT   DOMAIN     2049   2445       DNA_pol_B_exo1. {ECO:0000259|Pfam:
FT                                PF03104}.
FT   DOMAIN     2512   2961       DNA_pol_B. {ECO:0000259|Pfam:PF00136}.
FT   DOMAIN     3003   3070       zf-C4pol. {ECO:0000259|Pfam:PF14260}.
FT   REGION      386    415       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION      427    463       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION      476    500       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION      551    570       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION      575    601       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION      902    922       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION      990   1024       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION     1132   1186       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION     1269   1299       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION     1316   1335       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION     1502   1574       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION     1649   1682       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION     1808   1836       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION     1924   1950       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   REGION     2011   2106       Disordered. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   COILED     3026   3049       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS    386    401       Polar. {ECO:0000256|MobiDB-lite:H0ZP56}.
FT   COMPBIAS    431    453       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   COMPBIAS    575    589       Polar. {ECO:0000256|MobiDB-lite:H0ZP56}.
FT   COMPBIAS    996   1015       Basic. {ECO:0000256|MobiDB-lite:H0ZP56}.
FT   COMPBIAS   1146   1186       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   COMPBIAS   1276   1299       Polar. {ECO:0000256|MobiDB-lite:H0ZP56}.
FT   COMPBIAS   1316   1331       Polar. {ECO:0000256|MobiDB-lite:H0ZP56}.
FT   COMPBIAS   1658   1673       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                H0ZP56}.
FT   COMPBIAS   1808   1835       Polar. {ECO:0000256|MobiDB-lite:H0ZP56}.
FT   COMPBIAS   2018   2058       Polar. {ECO:0000256|MobiDB-lite:H0ZP56}.
FT   COMPBIAS   2085   2102       Polar. {ECO:0000256|MobiDB-lite:H0ZP56}.
SQ   SEQUENCE   3091 AA;  348399 MW;  2D2A8E733F6248C5 CRC64;
     GQKTCLHLHG IFPYLYVPYD GFGQHPECYL RQVAFSIDRA LNVALGNPSS TVQHVFKVSL
     VSGMPFYGYH EKERQFMKIY LYNPAMVKRV CELLQGGAIM NKSYQPHEAH IPYLLQLFID
     YNLYGMNLIN LAAVKFRKAR RKGDTSGVSK HHRTHLPENS SNVSFIEWEE DEIPSSLMLK
     GVEPQSTCEL EVDAVAADIL NQLDIEAQIG RNPGLQAIWE DEKQRRRQKC ESSQIKPPES
     QDRGFVPATE SEKFFQKRLK EILKQNDFSV TLSGSLDYSN GSEEFSAELT LHSEVLSAEA
     FPCTPANTVE VHDDKQMSKG DVHTDKEEAL INEEAILNIV ENSQSFQPLS QRLNQTTVFM
     GSSADEAMID LLAGLENDGY QMGHQKTLSH HRSLGSWRTS QNSDDEENEP QCEKEEMELS
     LLMSQRWDSS MEEPGQKRRS ASKNMHRSST EEDSSSEEEM EWSSNNMLLT NLSIPQLDGT
     ADENGDNPLN NESSRTHSSV IATSKMSVKT SIFHKDAATL EPPSSAKITF QCKHTSALSN
     HVLNNEDFVE DLSQPNTETR PELSVHSLTK ESTYSAKYPT PFSNSTHAEN SHKESNKKDT
     LSVPSCGNNI FDYEDDISSV NRPIPSRKYI SIRKAEKDVS FVHVGRHIGD NMLNKNLYNF
     SDMSHSKGKM SSEVNEKSSS ASINSFFPAT ATENCELVSC SGGSRTVVHS LENNTDEGGL
     NKLKIRYEEF QEHKAEKPSL SQQAAHYMFF PSVVLSNCLS QPQKLAPVTY KLQQGNKQSR
     LKLSKKKHSF INRQEPATAN DVASVKEVCY TQGNACSNIP DKDSALPSDL VQVPLEAFEN
     KMPTSTANYT DCQFADGSLE TEQSFGLCGN KYTLRTKRKV NYETEDSESS FVAHNSKINL
     PQPIESVESM DGSQKSRKRR KLSKKLPPVI IKYIIINRFR GRKNMLVKLG KVDSSEERVV
     LTEEKMNLYK KLAPLKDFWP KVPDSPATKY PIYPLTPKKS HKRKAKHKST KKKAGKPQKT
     GSTNIKRTLS FRKRTHAILS PPSPSYSAEA EDCDYNYSDV MSKLGFLSER STSPVNTSPP
     RCWSPTDPKA EEILTNLDRE ALFSRGPNIY NSKTVNTSVG KTSRAKTQVK KCKKKFSSPT
     VSTKKKKKIN QVDKTPDDGK KKPRAKQKMA EKASSRKRVV FKDEKGSSRS TTEVKFVLKH
     QDPHEISYNS ICSQPLHNLK DSPLPGYSAG YLPSAQLPSA DAQRNSSGCF HSLMEIDKPV
     DAQCLPAPRE DPHSSFASTP VASGREVPKM STQRSRTQSA VFRMKDSALI QNIFDPSNHS
     THMTQNAHIS KDKTPPKAEE IKNLQIRYLP PAGKLNETRD SLDTVKMDQL HTTNYLHCKD
     SNQQQVFCLP EASKHSDPCS SILKPSEENP GPLQLPKTCF VTSLKSPVKQ LNCDQNQRGF
     ILDMSHFKPE TTKQRPLSEA TMQPKPISQY KNRNIVAPSA FGEGQSGLAV LKELLQKRQQ
     KAQNASIAQE PLPDKPQLSK GIPCPLEQNK AIKRSRPVTL SRKSRSPRST KPKEKTAKLA
     KMESSSQPIT HRIDHSVSND SPIFFSDPGF ESCYSLEDSL SPDHNYNFDI NTIGQSGFCS
     FYSASQFVPA DQNLPQKFLS DAVQDLGSGQ TAESDFLSHN DQKSEEEKQH SSSTNKWMRP
     GSLSPELFEK TSLENSENHC HSQWRKTIHS SAARSSFIDT SCTQETEVCL NEKFKLNRNT
     VNKERFLNLS QPACSDWIQS HIRKETTFEP CQPLDSINTS FTSLLSSPDG ELLDAASEDL
     ELHVSRNNEV LTPTPDSSPR STSSPSQSKN GSFTPRTAHI LKPLMSPPSR EEIMATLLDH
     DLAETVYQEP FCSNPSDAPE KPREIGGRLL TVETRLPNDL LEFEGDFSLE GLRLWKTAFS
     AMTESPRPVS PPHYGHSTVN KRESNSHKTS EDKKIVIMPC KCAPSQQQVQ MWLHAKEEYE
     HFKKLPKSHS AELAKADENF SSAVFLEDER PIVPTKNSPA SVAENTKMQT KETCDKTSVN
     TKNDIDSNKT SCASKTHTTS ALEHDKEEEE EEEEDYYVSY SSPDSPVLPP WQQVASPDPK
     QSSLEDTEWK NQDILSFVEG SDVGSAQNSP CTQENIRTSF DISPFPVNED PGNSESVCLH
     STPIVHRKSQ DGMPEILGFT PLSAEPKAQK LSHKRGINTD GLRRVLLTTQ MKNQFAALGA
     PKKETSQIEG PSLNNTYGFK VSVENLQEAK SLHEVQHLTL ISMELHARTR RDLEPDPEFD
     PICALFYCIS SDSALPNTDK KEITGAIVID RGRTLSSQGS RDQAPLLTRS GVTGLEVSYA
     TDERTLFQEV VNIVKRYDPD ILLGYEVQMH SWGYLLQRAE ALNVDLCQMI SRVPDKSKEN
     RFATELDEYG ADTMSEINIV GRIVLNIWRM MRHEVTLTNY TFENVGFHVL HHRFPLFTFR
     VLSDWFDNKA DVYRWKMVDH YVSRVRGNLL LLEKLDLIDR TSEMARLFGI QFLHVLTRGS
     QYRVESVMLR IAKPMNYIAV TPSVQQRAQM KAPQCVPLIM EPESRFYSNA VLVLDFQSLY
     PSIVIAYNYC FSTCLGHVEN LGKYDAFKFG CTSLRVPPDL LYQIRHDITV SPSGVAFVKP
     SVRKGVLPRM LEEILKTRIM VKQSMKAYKH DKAVTRMLEA RQLGLKYIAN FTFGYTAANF
     SGRMPCTEIG DSIVHKARET LERAIKLVND TKKWGAHVVY GDTDSMFVLL KGATKEQSFK
     IGQEIAEAVT ATNPKPVKLK FEKVYLPCVL QTKKRYVGYM YETLDQKDPV FDAKGIETVR
     RDSCPAVSKI LECSIKLLFE TRDISQIKQY VQNQCMKLLE GKASMQDFIF AKEYRGSSAY
     KPGACVPALE ITRRMLAYDR RSEPRVGERV PYVIVYGTPG LPLIQLVRRP LEVLQDPSLR
     LNATYYITKQ ILPPLARVFS LIGIDVFSWY HELPRIQKAA SAARTELEGR KGTISQYFTT
     LHCPVCDELT QYGICNKCRS QPQHVAVILN QEIRELERKQ EQLVQICRNC TGCFDRQIQC
     VSLNCPVLFK LSRVSRELSK APYLRQLLDQ F
//
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